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Name : SYN_00640 (SYN_00640) Accession : YP_461926.1 Strain : Syntrophus aciditrophicus SB Genome accession: NC_007759 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 1952057 - 1953421 bp Length : 1365 bp Strand : + Note : - DNA sequence : ATGAAAGTCAACGACATTGACGTTTCTCTCCACCGAATTCCGCCTCAGAACCGGGAAGCTGAGCAGTCCATCCTGGGTGG AATCCTGCTGGATAATGAGTCGTTGCACAGTGTCCTGGAAATTCTGCAGATCCCCGATTTTTACAGCGAGGCTCATCGGC GGATTTTTTCCGCGATCCTTGATCTCTACGATCGAAATGAACCCTGCGACCTCATAACTTTAAGCAATATCCTCAATGAT AAAAGTCAGCTGGACAACGTGGGAGGCATGGCTTATCTTGCCTCCCTCGTGGACAATGTTCCTTCCTCGGCAAACATTAC TTACTACGCGAAGATCGTTAAGGAAAAATCCGTCCTTCGGTCGCTGATCGGCACCGCGACGGAAATCCTGAGCAGGAGCT ACGATCCGGTCAATGACGTCGAGGAGGTTCTTGATCAGGCCGAACAGGCCATTTTTGAAATTTCCCAGCACAAAATCAAA CCGGCCTTCTCGCCCATGCGGGAAATCATCAAGGACAGCTTCAAGACCATAGAACAGCTCTATGAACGCAAGTCCATGAT TACAGGAGTTCCCACTGGTTTTGAAAGGATAGACGATCTGACTTCAGGTTTGCAGAATTCGGATCTGATTATTATTGCCG GACGGCCCAGCATGGGAAAGACCGCCTTTGCCCTCAACATCGCCTCCTTTGTCGCTCTGGAGGCAGCGATTCCGGTCGCC ATCTTTTCCCTGGAAATGTCCAAGGAACAGCTTGCTCTCCGTATGCTGGCATCCGAAGCCAAGGTGGATTCGCAGCGCCT GCGGAAGGGTTTTCTCGGTGAAACGGACTGGCCGAAGCTGACGAATGCCGCCGGGAGACTAGCCGATGCGGCGATTTTCA TCGACGATACGCCTGCGATCACCGTTCTGGAAATGAAGGCCAAGGCAAGGCGACTCAAGGCGGAATCGGGACTAGGTCTG GTCCTGCTGGATTACCTTCAACTGATGCGCAGCGGGAATACAAAAGAATCCCGCGAACAGGAAATTTCGGAAATCAGCCG TTCTTTGAAAGCGCTGGCTAAGGAACTGAGCATTCCGGTTGTGGCCCTTTCCCAGCTCAACCGCAAGGTTGAGGACCGCT CCGACCGCCGTCCACAGATGGCGGACCTCCGCGAATCGGGAGCCATTGAACAGGACGCGGACGTCATCGCGTTTATTTAT CGTGACGAGGTTTATAACAAGTCGGATGACAATCCGGAAAAGGGTATTGCGGAAATCATCATCGGCAAGCAGCGAAACGG CCCGACAGGCACCGTCAAACTGGCGTTCATGGAAAAATATACGAGTTTCGAAAATCTTGCCCGGCCTGAGGACATGGCCT CTTAA Protein sequence : MKVNDIDVSLHRIPPQNREAEQSILGGILLDNESLHSVLEILQIPDFYSEAHRRIFSAILDLYDRNEPCDLITLSNILND KSQLDNVGGMAYLASLVDNVPSSANITYYAKIVKEKSVLRSLIGTATEILSRSYDPVNDVEEVLDQAEQAIFEISQHKIK PAFSPMREIIKDSFKTIEQLYERKSMITGVPTGFERIDDLTSGLQNSDLIIIAGRPSMGKTAFALNIASFVALEAAIPVA IFSLEMSKEQLALRMLASEAKVDSQRLRKGFLGETDWPKLTNAAGRLADAAIFIDDTPAITVLEMKAKARRLKAESGLGL VLLDYLQLMRSGNTKESREQEISEISRSLKALAKELSIPVVALSQLNRKVEDRSDRRPQMADLRESGAIEQDADVIAFIY RDEVYNKSDDNPEKGIAEIIIGKQRNGPTGTVKLAFMEKYTSFENLARPEDMAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-75 | 46 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-70 | 46 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-72 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-71 | 43 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-66 | 43 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-66 | 43 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-61 | 42 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-51 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-67 | 41 |
