Gene Information

Name : SYN_00283 (SYN_00283)
Accession : YP_461550.1
Strain : Syntrophus aciditrophicus SB
Genome accession: NC_007759
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1546362 - 1547069 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGAAAACCGTATTTTCCGTAAAGAGTCTTACAAAAATCTATGACATGGGCGAGATTCAGGTCAATGCTCTGCGGGG
CGTCGATATGGAACTCTACGAGGGTGAAATGGTTGTGTTGCTGGGGCCGTCCGGAAGTGGGAAATCCACCCTGCTGAACA
TCCTGGGCGGCCTCGATACGGCTACGGCCGGCGAGGTATCCTACAGGGGTAAAGACCTGACGAAAGCAACGGAACAGGAA
TTGACGGAGTATCGACGATATCACATCGGCTTTGTTTTTCAATTCTACAACCTGATCCCCAGCCTGACGGCCCTTGAAAA
CGTAGCTGTTGTCACGGAGATCTCCCGGAATCCCATGCTGCCGGAAGATGCCCTGTCGCTTGTCGGACTTCTGGACAGGA
AGGACCATTTTCCATCTCAGCTTTCCGGCGGCGAACAGCAGCGCGTCGCCATCGCCCGGGCCATCTCGAAAAATCCGGAG
GTTCTGCTCTGTGACGAGCCTACAGGGGCGCTGGATTTCAAGACGGGCATCCTGGTTCTGGAAGCTCTGGAACGGGTCAA
CCGGGAACTCGGTACGGCAACGGTCATCATTACGCACAACGCCGATATCGCCTCCATGGCCGACCGGATCATCAGCCTGA
GAAACGGCCTCATCGCCGACATTACGATAAACACCATAAAGAAGAAACCGGGAGAGCTTCGCTGGTAA

Protein sequence : 
MKKTVFSVKSLTKIYDMGEIQVNALRGVDMELYEGEMVVLLGPSGSGKSTLLNILGGLDTATAGEVSYRGKDLTKATEQE
LTEYRRYHIGFVFQFYNLIPSLTALENVAVVTEISRNPMLPEDALSLVGLLDRKDHFPSQLSGGEQQRVAIARAISKNPE
VLLCDEPTGALDFKTGILVLEALERVNRELGTATVIITHNADIASMADRIISLRNGLIADITINTIKKKPGELRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYN_00283 YP_461550.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-52 49
SYN_00283 YP_461550.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-30 44
SYN_00283 YP_461550.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-35 43
SYN_00283 YP_461550.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-38 43
SYN_00283 YP_461550.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 42