Gene Information

Name : SYN_00397 (SYN_00397)
Accession : YP_461095.1
Strain : Syntrophus aciditrophicus SB
Genome accession: NC_007759
Putative virulence/resistance : Unknown
Product : ATP binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1073831 - 1074598 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGAGCTCTGCCGATTCACCAGAATATCCGAGGGAGCGACTACTATGCGGGAGGCGCCCAATGATGATGGAGCCCACGTT
GACGAAACTTCACCGGATGAAACTCTCCGGCATGGCCGAGGCACTCACCGAGCAGAGTAAGAGCACACAGTACTCCGGAC
TTTCCTTCGAGGAGCGAATCGGGCTCCTCGTCGACCGGGAGATGACAGTCCGGGACAACCGTCGTCTTACAAAACTCCTG
AAGAGCGCAAGGCTGCGTTATTCCCATGCCTGCCCCGAAGAAATCAACTTCCGGACGCCGCGGGGGCTTTCCAGAGAAGT
CATCCTTTCCCTGATACAAAACGACTGGATAACGGAAAAACAGAACGTGATCATCACGGGTCCTACCGGCAGCGGCAAGA
CCTTCATTGCCTGTACCCTTGCCAACAGTGCCTGCCGAAACGGTCACAGCGCCCATTACATCCGGTTGCCCAGGTTGCTT
CAGGAACTTAATATTGCCCGCGGTGACGGCAGTTACGGAAAACTCCTTGCCCGTCTCGCTCGATATGCCCTGCTGATCAT
CGATGACTGGGGGTTGGCAAAACTCAATGACAAGGAACGAAGAGATCTCCTGGAGGTTCTTGAAGATCGCCACGGCTTCA
CGTCCACCCTCGTCTCCAGTCAGATTCCAACGGAGAAATGGCATAACATCATTGGAGACCCGACCATTGCCGACGCAGTA
CTGGACAGGCTGATCCACAATGCACACATCATCACCATGAAAGGATAA

Protein sequence :
MSSADSPEYPRERLLCGRRPMMMEPTLTKLHRMKLSGMAEALTEQSKSTQYSGLSFEERIGLLVDREMTVRDNRRLTKLL
KSARLRYSHACPEEINFRTPRGLSREVILSLIQNDWITEKQNVIITGPTGSGKTFIACTLANSACRNGHSAHYIRLPRLL
QELNIARGDGSYGKLLARLARYALLIIDDWGLAKLNDKERRDLLEVLEDRHGFTSTLVSSQIPTEKWHNIIGDPTIADAV
LDRLIHNAHIITMKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 1e-43 45
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 1e-43 45
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 3e-43 45
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 7e-41 44