Gene Information

Name : ELI_04005 (ELI_04005)
Accession : YP_457690.1
Strain : Erythrobacter litoralis HTCC2594
Genome accession: NC_007722
Putative virulence/resistance : Unknown
Product : cp4-like integrase protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 825653 - 826906 bp
Length : 1254 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGGCCTTGAGTGAGATTCAGATCAAAAAAGCGAAGGCGGCAGAGCGCCCATACAAGCTTGCGGATGGGGAGGGTCTATT
CCTCCTTGTTCAAAAGAACGGCTCGAAGCTCTGGCGGCTGAAATACCGTTACCACGGTAAGGAGAAGCTGCTTTCTTTCG
GCGCCTATCCCGAAGTAGGAATAGCGGCAGCAAGAGAACTCAAGAAAGTTGCCAAAGGTGTGCTGGCTGAGGGCAGGGAC
CCGATGGTCCACAAACCGGGTCGGGACTTCGAAGAGGCCAAGACCTTCAGGGCGATCGCCACCATGTGGCATCAGAACAG
AGCAAGTAGTCTCGATCCCGCGCATGCGAAGCGTGTCTGGTCACGCATGGACCAGGATGTGTTTCCTGACTTGGGCGAGC
TCATGATGCATGAGATCACTCCACCAGAAGTGCTAAAGGTCATTCGGAAAATCGAAGAGCGCGGCGCGCTCGACATCAGT
CGGCGGGCAAAGCAATGTATTGGACAGGTGTTCCAGTTCGCTATTGCCAGCGGCCTTTGTGATTCCGACCCTACTGCGCA
TCTTCGCGGGGCACTGAAGCCACGGCCTCGGGTCAAGCATATGGCGAAGCTACCTCTCGCGCAGCTACCCGAGCTGATGA
TTAAGATCGGGCAATATCAAGAAGAGGGTGAGAGACGCTCCGAGATTACCCGGGCAGCATTGAATTTCGCTCTTCTTACA
TGGGTGCGGACGAAGGAGCTTCGATTCGCCAAGAAGCACGAGTTCGAAGATATGGGTGGACCTTCACCAGTATGGCGCAT
TGGCGCTGACCGGATGAAAATGGGCCGCGAGCATATCGTGCCACTGTCGCGACAAGCCGCTTCTCTTGCTCAGGATTTGA
TCAGCAAGTCCGAAGGTAAATACGTCTTTCCAGGCCAGAAGCCCAAGATGCCGCTCTCAGAGAATACGATGATCTATGGC
CTCTATCGGCTCGGTTACCACGGGCGGCAAACTGTTCACGGCTTCAGGGGTCTGGCGAGCACCTGGGCGAATGAGCAGCT
TGTCGAGGTCGGCGATCCCCCGATGTGGATCCGTCGATATCATGAAGACTGGGTCGAACTGCAATTGGCACACAGCGAAG
AAAACGAAGTTCGCGGAGCATACAATGCTGCCGAATATCTCGCTCCTCGGCGTGCAATGTTGCAGGATTGGGCAGACTTC
CTCGACTCCATCGGCGGCAAGCCGCAAAACATTGCGGTCTTGAGGGCCGCTTGA

Protein sequence :
MALSEIQIKKAKAAERPYKLADGEGLFLLVQKNGSKLWRLKYRYHGKEKLLSFGAYPEVGIAAARELKKVAKGVLAEGRD
PMVHKPGRDFEEAKTFRAIATMWHQNRASSLDPAHAKRVWSRMDQDVFPDLGELMMHEITPPEVLKVIRKIEERGALDIS
RRAKQCIGQVFQFAIASGLCDSDPTAHLRGALKPRPRVKHMAKLPLAQLPELMIKIGQYQEEGERRSEITRAALNFALLT
WVRTKELRFAKKHEFEDMGGPSPVWRIGADRMKMGREHIVPLSRQAASLAQDLISKSEGKYVFPGQKPKMPLSENTMIYG
LYRLGYHGRQTVHGFRGLASTWANEQLVEVGDPPMWIRRYHEDWVELQLAHSEENEVRGAYNAAEYLAPRRAMLQDWADF
LDSIGGKPQNIAVLRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 2e-61 41
ECs4534 NP_312561.1 integrase Not tested LEE Protein 2e-61 41
int AAD44730.1 Int Not tested SHI-2 Protein 5e-61 41
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-61 41
int ACU09430.1 integrase Not tested LEE Protein 2e-61 41
int CAC39282.1 integrase Not tested LPA Protein 4e-62 41
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_04005 YP_457690.1 cp4-like integrase protein VFG0783 Protein 1e-61 41