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Name : ELI_13370 (ELI_13370) Accession : YP_459563.1 Strain : Erythrobacter litoralis HTCC2594 Genome accession: NC_007722 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2693409 - 2695361 bp Length : 1953 bp Strand : + Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases DNA sequence : TTGAAATCAAGCGGCATCCGCAAAACGGGCGAATTTCTCGAAAAACGCCTTGTGCGTATTTTGCGTTGGGCGGTGAACCT CAATCGGTTCGCAAAGCTCGTGGCCGTTCTCACGGTCGACCTCGCATTGTGCGTGGCGGCGGTTATCATAGCTTTCTCAT TGCGGTTCGGAGAATGGGAATTCTGGTCCGGCGCAATTCAGTCGGTGGTGGTCGTGGCGGTCGCGCTGTGGTTGCCGATT TTCTATCTCGCCGGCATTTATCGAACCGTTGTCCGCTTCATCGGTACGCGTACCTTGATGGGGATCGCCGTCTCGTGCGG TCTGATGGCAGTCGGTCTGGCCTTCGCCTTCACGCTCAATTCAACCCCGGGAATCCCGCGCACCGTTGCGTTCATCCAAC CGCTGATGTTCGCTCTGCTTTTGGTCTTCAGCCGACTTCTCGCCAGATATTTCCTGTTCGACCTGCTGAACCAGTATCAC AAGAGCGGCCCGCGCAGCCGCGTGCTGATTTACGGCGCCGGTTCGGCGGGGCGACAATTGGCACTGTCTCTCCGTCACGA ACCTGCGATGCATCTGGCAGGGTATATCGACGACGATGACCGCTTGGCCCGCAAGCATGTCGATGGCGTAAGGGTTCATC CGCCGACCGGTCTGGAAGACCTGATTCACGATCTCGAGATCGACACCGTCCTGCTGGCGCTGCCGCGAATAGGCCGCAAG CAGCGTGAAATGATCGTCCGCCAGTTCGAAGGGATCAGCGTTCGAGTTCTTACCCTCCCGGCGATGGGAGATCTGATCGA CGGCCGCGTTTCGGTAGGCGACCTGCGCGAGATCGAAATCTCGGACCTTCTGGGGCGCGACCCCGTACCGCCCAACCACC TGCTGTTGCACAAGACTATCCAGGACAAGGTCGTCATGGTTACCGGGGCCGGCGGCTCGATCGGCAGCGAGCTCTGTCGC CAAGTCAGCCAGCTGAAGCCTGAAGTACTTATCCTGGTGGAGATGGCCGAACACGCGCTCTACCTGATCGAAACCGAACT GCGCGGATTGCAGGAAAGCGGTGATATCGATCCCTCGATCGCTATAGTCACCGAACTTTGCAACGTGTCCAACACCGACC AGGTCAAGCGGATCATGCAACGCTGGCGACCGGGTACGGTTTTCCACGCTGCGGCTTACAAGCATGTGCCTCTGGTCGAG GACAATGTCATTTCCGGGATGACAAACAATATATTCGGCACGCTGAATTGCGCGCGCGCCGCGGCGGATGCAGGCGTTGC GCACTTCATTCTTATCAGCACGGACAAGGCCGTACGTCCGACCAATGTCATGGGTGCCAGCAAGCGGGTCTGCGAACTCA TTCTGCAAGCTCTGGCGGCAAATGGCAGCGAGACACTTTTCGCCATCGTCCGCTTCGGCAATGTGCTCGGCTCGAGCGGG TCGGTTGTACCGCGCTTCAAGGAGCAGATAAAAAACGGCGGGCCGATCACTCTGACCCATCGGGAGATCACGCGCTACTT CATGACCATCCCTGAGGCCTCGCAGCTGGTGATCCAGGCTGGAGCGATGGCCGAAGGCGGCGAAGTCTATGTCCTCGATA TGGGTGAGCCCGTGAAAATCTACGATCTTGCCAAGACGATGATCAATTTGTCCGGCCTGAGCGTAAAGGATGCGGAACAT CCGGATGGCGATATCGAAATCATAGAGGTCGGGCTTCGCAAGGGCGAGAAGCTGTACGAAGAATTGCTTATCGGGAATTC GCCCAAGCCAACACGGCACCAACGCATTATGCAGGCTCGAGAGGTCATGCTTCCATGGCCGGAACTCGAACCCCAACTTG CTGAACTGCGGAAGTTGCTGTCGGGCGGAAATCGCAGCGAAGCGCTGCATATCCTGCGCGCATTGGTGCCGGAGTACACG GCGCCGGCGACGGATTCCCATCGCGCCGCCTGA Protein sequence : MKSSGIRKTGEFLEKRLVRILRWAVNLNRFAKLVAVLTVDLALCVAAVIIAFSLRFGEWEFWSGAIQSVVVVAVALWLPI FYLAGIYRTVVRFIGTRTLMGIAVSCGLMAVGLAFAFTLNSTPGIPRTVAFIQPLMFALLLVFSRLLARYFLFDLLNQYH KSGPRSRVLIYGAGSAGRQLALSLRHEPAMHLAGYIDDDDRLARKHVDGVRVHPPTGLEDLIHDLEIDTVLLALPRIGRK QREMIVRQFEGISVRVLTLPAMGDLIDGRVSVGDLREIEISDLLGRDPVPPNHLLLHKTIQDKVVMVTGAGGSIGSELCR QVSQLKPEVLILVEMAEHALYLIETELRGLQESGDIDPSIAIVTELCNVSNTDQVKRIMQRWRPGTVFHAAAYKHVPLVE DNVISGMTNNIFGTLNCARAAADAGVAHFILISTDKAVRPTNVMGASKRVCELILQALAANGSETLFAIVRFGNVLGSSG SVVPRFKEQIKNGGPITLTHREITRYFMTIPEASQLVIQAGAMAEGGEVYVLDMGEPVKIYDLAKTMINLSGLSVKDAEH PDGDIEIIEVGLRKGEKLYEELLIGNSPKPTRHQRIMQAREVMLPWPELEPQLAELRKLLSGGNRSEALHILRALVPEYT APATDSHRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-76 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-77 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ELI_13370 | YP_459563.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-112 | 51 |
