Gene Information

Name : ELI_09800 (ELI_09800)
Accession : YP_458849.1
Strain : Erythrobacter litoralis HTCC2594
Genome accession: NC_007722
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1986798 - 1988687 bp
Length : 1890 bp
Strand : -
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGGCAGACATCAATTCCCCGCTCGAGATCGGCGTCACCACGGGGCCCATTCGCGGTTCAAAGAAAATCTATGTCGGCGC
GCGCACGGGTTCCGGCGTGCGCGTCGCCATGCGCGAGATCCAGCTGGAGGGCGGCGAGGAGCCGGTGCGGGTCTACGACA
CCTCGGGCCCCTATACCGACCCCGAGGTGAGCATCGACATCCAGGCCGGCCTGCCCGCGCTGCGGCGCGAGTGGATCATG
GGCCGCGGCGACGTCGAGGAATATGCCGCGCGCGCAGTGAAGCCGGAGGATAACGGCCAACTCGGCCCTGACCGTTCGGG
CGGTGTCCCGGCCTTCCCCAACGTGGCCAGGACCGTGCTGCGCGCGAAGCCGGGCCAGAATGTCAGCCAGATGCATTACG
CCCGCAAAGGCATCATCACGCCCGAGATGGAATATGTCGCTGAGCGTGAGAATGTCGGCCGGGCGAAGCTCGAAACCGCG
CCCGACGGGCAGGCATGGGGCGCCGAAATCCCGCAGGAGATCACGCCCGAATTCGTGCGCGACGAGGTCGCCCGCGGCCG
CGCGATCATCCCCAACAACATCAACCATCCCGAAACCGAACCGATGGCGATCGGGCGCAATTTCCTCGTCAAGATCAACG
CCAATATCGGCAACTCCGCCGTGGCATCGGATGTGGCGGCGGAAGTCGACAAGATGGTCTGGTCGATCCGCTGGGGCGCG
GACACCGTCATGGACCTCTCCACGGGGCGCAACATCCACGACACGCGCGAATGGATCATCCGCAACTCGCCCGTCCCCAT
CGGCACCGTACCGATCTACCAGGCGCTGGAGAAGGTCGGCGGCATCGCCGAGGACCTGACCTGGGACATCTTCCGCGACA
CGCTGATCGAACAGGCCGAACAGGGCGTCGACTATTTCACCATCCATGCCGGCGTGCGCCTGCCCTACGTCCCGATGACC
GCCAAGCGCGTCACCGGCATCGTGTCGCGCGGCGGCTCCATCATGGCGAAATGGTGCCTCGCGCATCACAAGGAGAGTTT
CCTCTACGAGCGCTTCGACGAGATCACCGAGATCATGAAGGCCTATGACATCGCCTATTCGCTGGGCGACGGCCTGCGCC
CCGGCTCCATCGCCGACGCCAACGACGAAGCCCAGTTCGCCGAGCTCTACACGCTGGGCGAGCTCACCAAGCGCGCCTGG
GAGCAGGACGTGCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGGAGAACATGGACAAGCAGCT
GGAGGCGTGCGGCGAAGCGCCGTTCTACACGCTCGGCCCGCTCGTGACCGACATCGCGCCGGGATACGACCACATCACGA
GCGGCATCGGCGCGGCGCAGATCGGCTGGTATGGCACCGCGATGCTCTGCTACGTCACGCCCAAGGAACACCTCGGCCTG
CCCGACCGCGACGATGTGAAGGTGGGCGTGGTGACCTACAAGCTCGCCGCCCACGCCGCCGACCTCGCCAAGGGGCATCC
TGCGGCCAAGGTCCGCGACGACGCGCTGAGCAAGGCCCGCTTCGAATTCCGCTGGCGGGATCAGTTCAATCTCAGCCTCG
ACCCCGACACGGCCGAACAATACCACGACCAGACCCTCCCCGCAGAAGGCGCCAAGACCGCCCACTTCTGCTCGATGTGC
GGCCCGAAATTCTGCTCGATGAAGATCACCCAGGAAGTGCGGGATTTTGCCGCCAAGCAGAACTCGGACAGCTATCTCGC
GAGCGAGAACATCAAGCGCGAAACCTCAGCCGAAGAGGCCGAGGAAGCGCGCGAGGGAATGTCCGACATGGCCGAACTTT
ACAAGGCCAAGGGCGAGAGGCTCTACCTACCCGAAAGCGAGGCGGACTGA

Protein sequence :
MADINSPLEIGVTTGPIRGSKKIYVGARTGSGVRVAMREIQLEGGEEPVRVYDTSGPYTDPEVSIDIQAGLPALRREWIM
GRGDVEEYAARAVKPEDNGQLGPDRSGGVPAFPNVARTVLRAKPGQNVSQMHYARKGIITPEMEYVAERENVGRAKLETA
PDGQAWGAEIPQEITPEFVRDEVARGRAIIPNNINHPETEPMAIGRNFLVKINANIGNSAVASDVAAEVDKMVWSIRWGA
DTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWDIFRDTLIEQAEQGVDYFTIHAGVRLPYVPMT
AKRVTGIVSRGGSIMAKWCLAHHKESFLYERFDEITEIMKAYDIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAW
EQDVQVMIEGPGHVPMHKIKENMDKQLEACGEAPFYTLGPLVTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEHLGL
PDRDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSKARFEFRWRDQFNLSLDPDTAEQYHDQTLPAEGAKTAHFCSMC
GPKFCSMKITQEVRDFAAKQNSDSYLASENIKRETSAEEAEEAREGMSDMAELYKAKGERLYLPESEAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 67
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 67