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Name : nrdA (AYWB_025) Accession : YP_456221.1 Strain : Aster yellows witches'-broom phytoplasma AYWB Genome accession: NC_007716 Putative virulence/resistance : Unknown Product : ribonucleoside-diphosphate reductase alpha chain Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 31581 - 34118 bp Length : 2538 bp Strand : + Note : - DNA sequence : ATGCCAGCCTTATTTCCCAAAAAAATTAAAGTTATTTATGATGGTCTCTTGCAAGGTCAAGTTTATGAAATGGCTCAAAG TTTAGGTTTTTCCTTTCAACACATCCAAGATGTCCCTTCCAAATTAACCGACGAAAACGTTTTTTTACTTACTCGCAGTG TGAAATTTGGACAAGTATCTGATGATGCAAAAACTTTTTTAGAAAAAAACGCTACCAAAGTAATAGGTGTTGCTGTGTCT GGCAACAAAAATTGGGGCAAAAACTATGGTAAAGCAGGCGATACTATCGCTTCTAATTATAATGTGCCTTTGGTTCTTAA ATTCGAAGGTTCAGGAATGCCAGAAGAAAGAGTTTTTTTAAAAAAATGGCTTGCTTGCTATTGTAACAACCAAAAATTGC CTTCTTATCAATTCAAAACCCAACCACAAATGCCCACCTCCAAAAAAACCGTCTTGCCACCTTGGATTATACTCAACAAT CAAATTATTGATGAACAAGGAAAAATCAAAGACCTAAATAAAGACAAAGAAGCTTTACAAAGTTTTTTGCAAGAAGGAGT TGCCCCCAAACTAAAACGCTTTGCCACTTTACAAGACAAATTAACTTTTTTACAAGAAAACGAATATTATGAAAGCACTT TTTTGCAAAAATACAACTATTCGCAAATCAAAGAAATCTACCAAATTGCTTACCAAAAAAACTTAACTTTCCCAACTTTT ATGGGAGCTTTCAAATTTTACCACGATTATGCTCTTAAAACTCGCGACAAACAACACTATTTAGAAACCTACGAAGACCG ATTGTCAATAAACGCACTTTATCATGCCAAAGGTGATTTTGCAATTGCCAAACGCCTCATTGTATCTTTAATAAACCAAG ACTTTACTCCTGCAACTCCCACTTTGCTCAACACAGGCAAAAAACATCGTGGCGAATTTGTCTCTTGTTTTTTGTTAGAA GCTGGCGACTCTTTAAACGATATTGCCCGTATTAATGAATTTTCGATGCAACTTTCTAAAATTGGCGGTGGGGTTTCGAT TAACATCACTAATTTGCGTGCTAAAGGTGAATCTATCAAAGGCATTAAAGGTGTGTGCAAAGGTGTTGTAGGTGTGTGCA AATTATTAGACCACAGTTTCCGTTATGCCGATCAAATGGGACAACGTACAGGCGCTGGTGCTGTTTATTTGAACGTTTTT CACGCCGATATCATTGATTTTTTAAGTACGAAAAAATTAAGTGCTGATGAAGATGTTCGCGTCAAAACTTTATCTTTGGG CGTTGTAGTACCTAACAAAATGATTGAACTTGCCCGCAAAAATGAAGTTATGTATACCTTTTTCCCGCACACTGTTTTCC TAGAATACGGTAAAAATTTTGCTGATATTGCAGTTGATATGAGCTATTGGTACGACATTTTAATTGTCAATCCCAAAGTG CAAAAAAAAGCCATCAATCCGCGCCAACTCTTAGAACTTATTGCCCAAATGCAAGGCGAATCAGGCTATCCTTATTTAAT GTTTTGCGATAACACCAATCAAGCAAATACTTCAGATCTGAAAGTCAAGTTTTCTAATTTATGCACTGAAATCCTTCAAC CCACCATCACTTCACATTACAAAGATTACCATCAAACCCAACAAGACGAAATTGGTATGGACGTTTCATGCAATCTAGCA TCAGGACATATGGGGAACATGATTACTAACAATACCATTCAAGAAACTGTTTTTATGGCAATGGAAGTAATGAACTGTGT TTCTGAAAATACAAACATTAGTTATGTTCCAGCTGTTGCAAAAGCCAATTTTCTTAACCGCAGTGTAGGTTTTGGAATCA TGGGTCATCACGGCTTTTTAGCTCAAAACTACATTGCTTTTGGAAGTGAAGAAAACAAAGATTTAATTGATGTTTTTTTT AACGCTATTAATTTTTACAGCCTCCTTCATTCTTGCAATAAAGCAAAAACCACAGGCAAAAAGTTTTATCGTTTTAAAAA ATCCAAATACGCTGATGGTAGTTATTTTAACAATCGTGGTGAAATTTTACCTAAAACTAACAAAATCAAAAAAATGTTCC AAAATATCACCCTTCCCACCCAAAGCGATTGGAACCAACTCAAACAAGATGTCATGAAATTTGGACTCTACAATTCTCAT CGTCTTGCAATAGCTCCAAACGGATCAATTGGATATATTATGGGAGCAACTCCTTCCTTGACTCCTGTAAAACAATTAGT AGAGGAACGCACCTATGGTAACTCTAAAACTTACTGTCCAATGCCTGCATTAAAGCAAGCTTCCTTTATGTACACCACTG CTTATAAAATAAACAAATACGATCTCATTGATGTTATTGCTATTGCCCAAAAGCACGTTGATCAAGGTATTTCTTTTGAA CTTGGTATTACATCTGATATTACTACGCGTGAATTACAAAAATACTATCTTTACGCTCATCACAAAAAGATAAAAACCCT TTATTACACACGAACCCAAAAGCTAAAAATTGATGAATGTGAGGCTTGTGGTGTTTAA Protein sequence : MPALFPKKIKVIYDGLLQGQVYEMAQSLGFSFQHIQDVPSKLTDENVFLLTRSVKFGQVSDDAKTFLEKNATKVIGVAVS GNKNWGKNYGKAGDTIASNYNVPLVLKFEGSGMPEERVFLKKWLACYCNNQKLPSYQFKTQPQMPTSKKTVLPPWIILNN QIIDEQGKIKDLNKDKEALQSFLQEGVAPKLKRFATLQDKLTFLQENEYYESTFLQKYNYSQIKEIYQIAYQKNLTFPTF MGAFKFYHDYALKTRDKQHYLETYEDRLSINALYHAKGDFAIAKRLIVSLINQDFTPATPTLLNTGKKHRGEFVSCFLLE AGDSLNDIARINEFSMQLSKIGGGVSINITNLRAKGESIKGIKGVCKGVVGVCKLLDHSFRYADQMGQRTGAGAVYLNVF HADIIDFLSTKKLSADEDVRVKTLSLGVVVPNKMIELARKNEVMYTFFPHTVFLEYGKNFADIAVDMSYWYDILIVNPKV QKKAINPRQLLELIAQMQGESGYPYLMFCDNTNQANTSDLKVKFSNLCTEILQPTITSHYKDYHQTQQDEIGMDVSCNLA SGHMGNMITNNTIQETVFMAMEVMNCVSENTNISYVPAVAKANFLNRSVGFGIMGHHGFLAQNYIAFGSEENKDLIDVFF NAINFYSLLHSCNKAKTTGKKFYRFKKSKYADGSYFNNRGEILPKTNKIKKMFQNITLPTQSDWNQLKQDVMKFGLYNSH RLAIAPNGSIGYIMGATPSLTPVKQLVEERTYGNSKTYCPMPALKQASFMYTTAYKINKYDLIDVIAIAQKHVDQGISFE LGITSDITTRELQKYYLYAHHKKIKTLYYTRTQKLKIDECEACGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 3e-120 | 41 |
