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Name : lysU (AYWB_128) Accession : YP_456324.1 Strain : Aster yellows witches'-broom phytoplasma AYWB Genome accession: NC_007716 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 151673 - 153163 bp Length : 1491 bp Strand : + Note : - DNA sequence : ATGAAAAAAAAAATAAGCGAACAAGAAATTATTAGACATCAAAAAATGAATGAATTAAAAAAAATAAATATCGATCCTTT TGGAAAAAAAATTGTCCCTTCTCATTCCATCAAACAAATTATTTTGCAATACCAAAAAGAAGATAGTTTAGCCTTCGAAC AATCACAAATCAATGTTTGTGTAGCTGGTAGAATTGTTTTAAAAAGAGGACAAGGCAAAGCGGGTTTTTTGCATTTACAA GATTTTGATTTTCGAATACAAGCATATGTAAAGTTGGATTTGGTGGGAAAAGATGCTTTTCAAATTTATCAAAATTGTGA TTTAGGAGACATCATAGGCATCAAAGGGTTTTTATTCAAAACCAAAACGCAAGAATTAACCATTAAAGCCTTGGAATTTA TTCACCTTACCAAAGCTCTAAAACCTTTACCTGACAAATTTCATGGCTTGCAAAATCGCGAAGATATGAGAAAAAAACGC TATGTTGATCTAATCGTAAACGAAAAAACAAGACAAGTATTTTTAACTCGCAGTTTGATTATGAAATACATTAGAAATTT TTTTGATAATCAAGGCTTTTTAGAAGTAGAAACCCCCATTTTACAACCAACTTTGGGAGGCGCTTCTGCCAAACCTTTTA TCACTCATCACAACGCTCTTAATTGTGATTTTTACTTGAGAATTGCCACCGAATTGCCCCTTAAAAAATTAATTGTTGGT GGGATGAATAAAGTCTATGAAATTGGACGTCTTTTCAGAAATGAAGGAATTGACGCCACACATAATCCCGAATTTAGCAC TATTGAGGCTTACTTGGCTTATGCTGATATGCAAGATATTATGGACTTAACAAAACAATGCTTACAAGAATTAGTCCAAA AAATTTTTGGCAAGTTGCAATTTACTTACCAAAACCAAGAAATTGATTTTTCCCATTTTGCAAAAGTAAGTATGGTTGCA TCAATCAAGGAAAAGACAGGAATTGATTTTACAGACCATTTTACCTTGGAACAATGCCTTTCTTTGGCAAAAAAACACAA AATTGAAGTTATGCCCCACTTTAGTCAAGGACATATCATTGAGGCTTTTTTTGGAAAATACGTAGAAAATGCCCTCATTC AGCCTACTTTTGTCTACGGACATCCACTGGAAATAAGCCCTTTGGCAAAACAAAATGAATTTGATCCTCGTTTTACTGAC CGTTTTGAACTTTTTATCGTAGGTAAGGAATTTGCTAATGCTTTTAGAGAACTTAACGACCCTATCGAACAAGAAAAACG CTTTTTAAACCAATTAAAACAAAAACAATTAGGCAACGAAGAAGCCAATGACATGGACTATGATTTCTTAAACGCCCTTA ATTATGGCATGCCTCCAACTGGTGGTCTTGGAATGGGAATTGATCGTTTGGTTATGCTTTTAACCGATACTGCAAATATT CGTGATGTTATTTTATTTCCGCATTGTAAAAATCAAAATAAATTCATATAA Protein sequence : MKKKISEQEIIRHQKMNELKKINIDPFGKKIVPSHSIKQIILQYQKEDSLAFEQSQINVCVAGRIVLKRGQGKAGFLHLQ DFDFRIQAYVKLDLVGKDAFQIYQNCDLGDIIGIKGFLFKTKTQELTIKALEFIHLTKALKPLPDKFHGLQNREDMRKKR YVDLIVNEKTRQVFLTRSLIMKYIRNFFDNQGFLEVETPILQPTLGGASAKPFITHHNALNCDFYLRIATELPLKKLIVG GMNKVYEIGRLFRNEGIDATHNPEFSTIEAYLAYADMQDIMDLTKQCLQELVQKIFGKLQFTYQNQEIDFSHFAKVSMVA SIKEKTGIDFTDHFTLEQCLSLAKKHKIEVMPHFSQGHIIEAFFGKYVENALIQPTFVYGHPLEISPLAKQNEFDPRFTD RFELFIVGKEFANAFRELNDPIEQEKRFLNQLKQKQLGNEEANDMDYDFLNALNYGMPPTGGLGMGIDRLVMLLTDTANI RDVILFPHCKNQNKFI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-93 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysU | YP_456324.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-93 | 47 |
