Gene Information

Name : SGP1_0047 (SGP1_0047)
Accession : YP_456159.1
Strain :
Genome accession: NC_007713
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 75653 - 75976 bp
Length : 324 bp
Strand : +
Note : -

DNA sequence :
ATGACAACGACCAAACATTACTCTCCGGAAGTCCGTGAACGGGCAGTTAATCTGGTGCTGGAAACTCAGCATGAGCATGA
TTCGCAGTGGAAAGCGATCCAGTCCATTGCACCAAAAATTGGCTGCATACCTGAGACGCTGCGTCTGTGGCTCAAGAAAC
ATGAACAGCGTCTGGCGGTGAAAAACAACATCAACACGGATGAACGTCAGCGGCTTAAGGAGTTGGAGCGTGAGAACCGT
GAGCTTCGTCGCAGCAACGATATTCTACGGCAGGCGTCAGCATATTTTGCCCAGGCGGCGCTCGACCGCCACTGCAAGAA
ATAG

Protein sequence :
MTTTKHYSPEVRERAVNLVLETQHEHDSQWKAIQSIAPKIGCIPETLRLWLKKHEQRLAVKNNINTDERQRLKELERENR
ELRRSNDILRQASAYFAQAALDRHCKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 6e-18 69
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 6e-18 69
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 6e-18 69
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 6e-18 69
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 3e-18 68
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 3e-18 68
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 4e-18 68
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 3e-18 68
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 3e-18 68
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 2e-17 67
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-17 67
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 2e-17 67
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-16 63
unnamed AAF09023.1 unknown Not tested SHI-O Protein 1e-16 63
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-16 63
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 1e-16 63
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 1e-16 63
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 8e-17 63
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 1e-16 63
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-17 63
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 2e-15 62
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 2e-15 62
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 1e-16 62
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-15 62
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-15 62
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 2e-15 62
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 3e-15 62
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 61
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 9e-15 60
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-15 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SGP1_0047 YP_456159.1 transposase VFG0643 Protein 3e-17 63
SGP1_0047 YP_456159.1 transposase VFG0606 Protein 3e-17 62
SGP1_0047 YP_456159.1 transposase VFG1717 Protein 9e-16 62
SGP1_0047 YP_456159.1 transposase VFG1603 Protein 8e-16 61