Gene Information

Name : SG0573 (SG0573)
Accession : YP_454253.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion chaperone
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2956
EC number : -
Position : 968094 - 968645 bp
Length : 552 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACTAAAACCAGACACGCCAAAAGCCATTCCTCTCACCAGAAAGAGAATCTGGAGCAACAATATACAGAGAATTT
CATGGAGGCGATACAAGATGGTGCCACATTGAAAGATATACATCAGATACCTGAGTTGACTATGCAGGATGTTTATTTGT
ATGCCTACGATTTTTATCAGCAGGGTCGTCTGGATGATGCGGAATCATTGTTTCGCTTCCTCTGTGTTTATGATTTTTAT
AATCCCGAATACGTTATGGGATTGGCGGCGGTACATCAGTTAAAAAAATCCTATGAAAAAGCTATCGAGCTTTATGCCCT
GACGTATTCATTATCGGAAAACGACTACCGTCCTATGTTATATGCAGGTCAATGTAATCTCATGCTGCGTAAAGGAGATA
TGGCCAAACGCTGTTTTGAGATTGTGCTTGAAAAATCACAGGATGAACACCTCATGCAAAAAGCCCAGGCTTACCTTGTT
GCATTAGCGGAGTTGGAGACAAACGAAGCGGATGCACCAGGAGACAATAAGGAGACCAGCGACCATGACTAG

Protein sequence :
MKTKTRHAKSHSSHQKENLEQQYTENFMEAIQDGATLKDIHQIPELTMQDVYLYAYDFYQQGRLDDAESLFRFLCVYDFY
NPEYVMGLAAVHQLKKSYEKAIELYALTYSLSENDYRPMLYAGQCNLMLRKGDMAKRCFEIVLEKSQDEHLMQKAQAYLV
ALAELETNEADAPGDNKETSDHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sycB AAS66850.1 SycB Not tested SSR-1 Protein 4e-57 99
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 7e-42 53
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 7e-42 53
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 7e-42 53
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 7e-42 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0573 YP_454253.1 type III secretion chaperone VFG2451 Protein 3e-47 58
SG0573 YP_454253.1 type III secretion chaperone VFG0547 Protein 2e-42 53
SG0573 YP_454253.1 type III secretion chaperone VFG0988 Protein 1e-38 53
SG0573 YP_454253.1 type III secretion chaperone VFG1769 Protein 4e-39 52