Gene Information

Name : SG0570 (SG0570)
Accession : YP_454250.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus SpaQ
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 965769 - 966023 bp
Length : 255 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGAGATTTCATATATAGGCAATTCTGCTTTGCTCCTGGTACTGAAGCTTTCTGCCGTGCCTATTGCGATGGCGAC
TATCGTCGGTCTAGTAGTAGGGTTATTTCAAACGGTCATGCAGATCCAAGAACAAACTCTGCCCTTTGGTTTGAAAATGC
TCGCGGTATTTGCCTGCCTTCTTATGCTGATGGGATGGTTCGCCAGCGAAGGCTTGCGTTTCGCCACCGAATCATTTCTG
ATTGGTTTCCGGTAA

Protein sequence : 
MSEISYIGNSALLLVLKLSAVPIAMATIVGLVVGLFQTVMQIQEQTLPFGLKMLAVFACLLMLMGWFASEGLRFATESFL
IGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaS AAS66847.1 YsaS Not tested SSR-1 Protein 1e-27 100
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 6e-13 56
spaQ YP_217808.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 3e-11 54
spaQ NP_457283.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-11 54
spaQ NP_806492.1 virulence-associated secretory protein Virulence SPI-1 Protein 3e-11 54
spaQ NP_461810.1 needle complex export protein Virulence SPI-1 Protein 3e-11 54
ECs3724 NP_311751.1 EpaQ Not tested LIM Protein 1e-11 52
epaQ AAZ31292.1 EpaQ Virulence ETT2 Protein 7e-12 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0570 YP_454250.1 type III secretion apparatus SpaQ VFG2454 Protein 3e-15 65
SG0570 YP_454250.1 type III secretion apparatus SpaQ VFG0550 Protein 9e-12 54
SG0570 YP_454250.1 type III secretion apparatus SpaQ VFG1013 Protein 2e-11 53
SG0570 YP_454250.1 type III secretion apparatus SpaQ VFG1772 Protein 5e-14 52