Gene Information

Name : SG0561 (SG0561)
Accession : YP_454241.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus InvG
Function : -
COG functional category : N : Cell motility
COG ID : COG1450
EC number : -
Position : 956104 - 957864 bp
Length : 1761 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAAGGTAGTGCATTTTTTTAAGGTCGGTTGTGCCTGGCTGTTGCTAGCCACCGTAGGCATGCCGACGGCGGCCAC
GGCAGGGCCGTTTCGCTCCGAGCAGGCGAACAATGACATCTCCAGCGGCAGTATTAATGAATACGTCGCCAACAAAAGCA
GCATACGCCAGCTGCTCTCCGCGTTATCGGGCGAAATACATAAGCCTATTATCGTCAGCGAATTGGCCGGTCGTAAACAG
GTCTCGGGCAAGTTCGACATGGAGAAACCGTTACAGCTGCTTGAAAGCCTGGCCGCCAGGACGGCTCTGATTTGGTATAA
CGACGGTAGCGCAATTTATGTCTATGACGTCAGTGAAATGCAAAGCCAGATGGTACAGCTGCGTCATGCGCCATTTGAAC
GTTTGATGGCCTTTCTCAAGTCCACCATGCTGTATGACCAGCGTTTCCCGCCGCGCACTAACCGCAGTTCAGGCGGGTTT
TACATCTCCGGACCGCCGGTCTATGTCGGTTTGGTCATCGCTGCTGCCAAGTATCTTGACAATACCTTTAGCGATACCAC
GACCGGCAGAAATGAGATTCGCGTGATCAGTTTGAAAAATTCCTTCGTCACCGATCGTAATTATTCGCAGCGGGACTCAC
CCATTACGATACCGGGCATCGCAACGGTATTAAATCAATTGCTGAACGGCGCTAACGGCAAAGGTGTCTCACGGGACAGC
CGTAATCCGGTGCCGCTGGCAACCATCACGATTGACCGCGATACCCGCAGCGCATTGGCCGCTGCCAATGCCACAGAAGG
TGGGGGCAATTTCCCCGCGCTGCCTCCCTTGCCACAGCAAAATAAGAGTGCCCAGACGGCGGAAAACATCAATTACGGCA
CGATAAATATCGTTGCTTATCCCGACACCAACAGTTTGCTAATCCAGGGGGCGAGCCAGCAGGTGAGCTATGTGCAAGAT
CTGGTTACGGCGATTGATATTGCCAAGCAACAGATTCAGCTTTCGCTCTGGATACTGGATATTGACAAGGAAGAGGTTAA
TCAACTGGGTGTGGATTGGGCAGCCCGCGCTAATATTGGGAGCGGCAGCATTGAGTTTAATTCCAGTTCGCTGAGCGCCA
GCACCAGTTATCAGTTTCTTGCCAAGGTCAGCGCGCTAGCCAGTCGTAAGGATGCTCAAGTTGTCGCACATCCGGAAATT
TTAACGCAGGAAAACATTCCGGCTTTATTTGACAACAATTCGAGTTTTTATGTGCAGGTGAAAGGTGAACGTACCGCCAC
GCTGGAAAAAATCACTTACGGCACGCTGATAAGCGTCTTGCCGCGGCTGTCCAGCGGCAGTAAAGAAATCGAAATGATTC
TGGATATCCAGGATGGCGGTCTCATGACCGGCGACGATAACGCCGTCATGCAGGTTGCCGAGTTACCGCTGGTGAATACT
ACCCAAATCAGTACTGAGGCGCGGGTACCCAAGGGAAGTAGTTTGCTGGTGGGGGGCTATAGCCGCGATCAGCGTGTTAA
CGCCGGTTGGGGGATTCCCGTGCTGAGAGACATCCCGTTTTTGGGGCGACTGTTTGATTACCGTTATAAACAAACCAAAC
AATTTGTACGTATGTTCCTTATACAGCCCAAGTTGTTGCCTCAGGGAGCGGTATGGGAAGGCGTTGACGAAAACCCGTCG
CTCGGCCACACCTCACTGGGCACCAATATTACCTTAAAAGCGACCGTGGCCATGCTGCACAATTATATGGCCCAGCATTA
A

Protein sequence :
MSKVVHFFKVGCAWLLLATVGMPTAATAGPFRSEQANNDISSGSINEYVANKSSIRQLLSALSGEIHKPIIVSELAGRKQ
VSGKFDMEKPLQLLESLAARTALIWYNDGSAIYVYDVSEMQSQMVQLRHAPFERLMAFLKSTMLYDQRFPPRTNRSSGGF
YISGPPVYVGLVIAAAKYLDNTFSDTTTGRNEIRVISLKNSFVTDRNYSQRDSPITIPGIATVLNQLLNGANGKGVSRDS
RNPVPLATITIDRDTRSALAAANATEGGGNFPALPPLPQQNKSAQTAENINYGTINIVAYPDTNSLLIQGASQQVSYVQD
LVTAIDIAKQQIQLSLWILDIDKEEVNQLGVDWAARANIGSGSIEFNSSSLSASTSYQFLAKVSALASRKDAQVVAHPEI
LTQENIPALFDNNSSFYVQVKGERTATLEKITYGTLISVLPRLSSGSKEIEMILDIQDGGLMTGDDNAVMQVAELPLVNT
TQISTEARVPKGSSLLVGGYSRDQRVNAGWGIPVLRDIPFLGRLFDYRYKQTKQFVRMFLIQPKLLPQGAVWEGVDENPS
LGHTSLGTNITLKATVAMLHNYMAQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 0.0 100
ECs3733 NP_311760.1 EivG Not tested LIM Protein 5e-103 44
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 4e-104 43
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 4e-104 43
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 1e-103 42
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 1e-103 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0561 YP_454241.1 type III secretion apparatus InvG VFG1782 Protein 2e-97 42
SG0561 YP_454241.1 type III secretion apparatus InvG VFG0559 Protein 5e-104 42
SG0561 YP_454241.1 type III secretion apparatus InvG VFG1004 Protein 5e-90 41
SG0561 YP_454241.1 type III secretion apparatus InvG VFG2463 Protein 8e-106 41