Gene Information

Name : SG0558 (SG0558)
Accession : YP_454238.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 953562 - 953819 bp
Length : 258 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGACCTCAGAGCCTGGAACGGTAATGGCTGGTTTATCGATGATATCGCCAAAGATTTTGATACCGGCGCACAAAC
CATGATGGAGCAGCTTGAAACGGCGCGCAAAGCGTTATCTGACGCTCCCGATAATCCAAGTGTGTTAGCGGAGTTCCAGG
CTAAATTATCTGAGTATACCCTTTTCAGAAATGCCCAATCGTCCACCGTCAAAACGTTTAAAGATATTGGCGCCGCGATT
ATCCAAAACTTCCGCTAA

Protein sequence :
MSDLRAWNGNGWFIDDIAKDFDTGAQTMMEQLETARKALSDAPDNPSVLAEFQAKLSEYTLFRNAQSSTVKTFKDIGAAI
IQNFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 3e-33 100
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 1e-16 53
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 1e-16 53
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 9e-17 53
ECs3718 NP_311745.1 EprI Not tested LIM Protein 3e-16 50
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 3e-16 50
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 3e-16 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0558 YP_454238.1 type III secretion apparatus VFG0996 Protein 1e-16 54
SG0558 YP_454238.1 type III secretion apparatus VFG0535 Protein 4e-17 53
SG0558 YP_454238.1 type III secretion apparatus VFG2466 Protein 6e-15 44