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Name : SG0556 (SG0556) Accession : YP_454236.1 Strain : Sodalis glossinidius morsitans Genome accession: NC_007712 Putative virulence/resistance : Virulence Product : type III secretion apparatus Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 952408 - 953187 bp Length : 780 bp Strand : - Note : - DNA sequence : ATGTTTAAGCGACTTCTATTAACCTGTATGGTCATTATCGCCGCTTTGCTGACGACAGGCTGTGACAACACCATTTTGCT GAACAATTTAAGCCAGGAACAGGCCAACAAAGTTTTAGCGGTATTACAGCAGCATAATATCGCCTCGCAAAAAAGCGGTT CGCTGAAGGAAGGGTATGCAATTACGGTTCCCAAAAGCGATACCACCACGGCGCTGTCAATTCTGAATCAGTATCAGCTC CCGGCCAAACCTGAAGTCCAAATTTCTCAGGCGTTCCCCGATAACGCCTTAATTGCTTCGCCGCAGGCTGAACGGGCACG TATGTTGTCATTACAGGAGCAGCGTTTAGAACAATCGTTAAAGATTATCAGCCAAGTGGTGAATGCTCGTGTTCACGTCA GTTATCCGCTGAACGATAATACGTTTATTACAGACCCACCCGCTGAGCGGGTCTCTATTTTGATTACCTACAGCGGCAGT CTCAATGAAAATATGTTCATCAGCAAAATAAAAACGTTGATCAAAAACGGTCTGGCCAACGTTCGCTTTGAAGATATTTC CGTTGTGCTGTTCCAGGCGCCTCCCTTGCAATATAGCGCGCCAACGCAGGGTGCCCAGCCGTTTATAACACCTTGGTTGT ATGCCCTTTGCGGAGTGCTATTGGCCGCATTGCTGGCAGGCGGCTCGGTGTTATATCTGCTGGTCAAAAAACAGCGACCG GAGACAGCGCAGGAGCTCACGCCACAGGATCCACCGGCGCAAGAGGAGAAACCGGTATGA Protein sequence : MFKRLLLTCMVIIAALLTTGCDNTILLNNLSQEQANKVLAVLQQHNIASQKSGSLKEGYAITVPKSDTTTALSILNQYQL PAKPEVQISQAFPDNALIASPQAERARMLSLQEQRLEQSLKIISQVVNARVHVSYPLNDNTFITDPPAERVSILITYSGS LNENMFISKIKTLIKNGLANVRFEDISVVLFQAPPLQYSAPTQGAQPFITPWLYALCGVLLAALLAGGSVLYLLVKKQRP ETAQELTPQDPPAQEEKPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaJ | AAS66833.1 | YsaJ | Not tested | SSR-1 | Protein | 7e-96 | 100 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 5e-29 | 42 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 5e-29 | 42 |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 5e-29 | 42 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-29 | 42 |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 3e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SG0556 | YP_454236.1 | type III secretion apparatus | VFG1787 | Protein | 2e-34 | 50 |
| SG0556 | YP_454236.1 | type III secretion apparatus | VFG0533 | Protein | 2e-29 | 42 |
