Gene Information

Name : SG2104 (SG2104)
Accession : YP_455784.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3642187 - 3643062 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTCTGAGTGATGTGAAGGTTCGTGCTGCCAAGCCTGAAGCAAAAGCCTATAAGCTTAAAGACGGCGAAGGCATGGT
ATTGCTAGTTCACCCTAACGGTTCAAAATACTGGCGGTTACGTTATCGCTTCGGCGGCAAAGAAAAGATGCTGGAGTTGG
GACAATACCCTGAAGTTTTGTTAGCGGACGCCCGATCACGTAGAGACGAAGCGCGTAAGCTGTTAGCTAACGGCATTAAT
CCTATCGAGAATAAGAAAGCCATTAAGGTAGAACAAGAGCAGGAAGCGATAACTTTTGAAGTGGTCGCCAGAGACTGGCA
CGCCAGCAATCAGAAATGGTCTGCATCGCATAGTGCTCGGGTATTGAAAAGCTTGGAAGATAATCTTTTTACTGCCATTG
GTAAGCGGAATATTGCGGAACTGAAGACGCGAGATCTGCTTGTACCCATCAAGGCGGTGGAATCATCCGGACGACTCGAA
GTCGCCGCCCGCTTACAGCAGCGCACTACCGCAATTATGTGCTTTGCTGTGCAGAGTGGCTTAATCGATTACAACCCTGC
ACAAGAGATTGCTGGTGCGGTTGCTACTGCGAAAAGACAGCATCGTGCGGCTCTGGAGCTTAACCGCATACCCGAATTAC
TTCATCGCATTGATCACTATTCTGGAAGACCATTAACCCGATTGGCTGTTGAACTCACTTTGTTGGTTTTCATCCGTTCA
AGCGAACTGCGTTTTGCTCGCTGGCCTGAAGTGGATTTTGACACGGCAAAGTGGACGATTCCTGGAGAGCGTGAACCATT
GGAAGGCGTTAAGCACTCTCAAGTGGTTCGAAGATGCGGACGCTTCATCTTGTACCGTTATCGCGGCAGGCTCTAG

Protein sequence : 
MALSDVKVRAAKPEAKAYKLKDGEGMVLLVHPNGSKYWRLRYRFGGKEKMLELGQYPEVLLADARSRRDEARKLLANGIN
PIENKKAIKVEQEQEAITFEVVARDWHASNQKWSASHSARVLKSLEDNLFTAIGKRNIAELKTRDLLVPIKAVESSGRLE
VAARLQQRTTAIMCFAVQSGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLHRIDHYSGRPLTRLAVELTLLVFIRS
SELRFARWPEVDFDTAKWTIPGEREPLEGVKHSQVVRRCGRFILYRYRGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAD44730.1 Int Not tested SHI-2 Protein 3e-61 45
int CAC39282.1 integrase Not tested LPA Protein 6e-62 45
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-62 45
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 6e-60 44
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 6e-60 44
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 4e-60 44
int AAC31482.1 CP4-like integrase Not tested LEE Protein 3e-60 43
int ACU09430.1 integrase Not tested LEE Protein 3e-60 43
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 4e-60 43
ECs4534 NP_312561.1 integrase Not tested LEE Protein 4e-60 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG2104 YP_455784.1 phage integrase VFG0598 Protein 3e-60 44
SG2104 YP_455784.1 phage integrase VFG0783 Protein 2e-60 43