Gene Information

Name : SG2082 (SG2082)
Accession : YP_455762.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus SpaR
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3588560 - 3589354 bp
Length : 795 bp
Strand : -
Note : -

DNA sequence :
ATGATCTTGCCACTGTGGTCTTCCCTGTTTGAATGGCTGATTACCCTAGCGGTCGTGTCGGCGCGCATTACGCCGGCGTT
TTTCCTGTTGCCGTTTTTTAGCGCCAGCGTGCTCAGTCTTACCGTTCGCACACCGGTAATTTTTTTTATCGGCGCAGCTT
TGTGGCCTTATTCCTTCGGCGCCATGGCGTCGCTCGACGGTGCACGGATAGCAGACATCCTGCTGCGCGAGGTGGCGATC
GGTCTGCTATTGGCAATCCTGCTGGCGCTACCGTTTTGGGTTATGCATGGGCTGGGGGCGCTGATTGACTATCAGCGCGG
CGCCTTACTCAGCAGCGCCTATGATCCTATCAGCGGCGTCGATACCTCGGAACTGGCAAATTTGTTCAATCTGTTTTTTG
CCGCCGTGTTCCTGCAGGGGGGCGGACTGACTTTGTTACTTGAGGTTTTTCTCGGCAGTTATCAACTGTGCGATCCCCTA
GAGCCCTCCCTACCATCCCTCGCCAAGGTGACAACCTTGTTGCAGACGATGGCGACACGCATCCTGATCCTGTCGAGTCC
CGTTTTGGTGGTGCTGTTGCTCATCGAGATTTCGCTGGGTCTGCTTTCACGCTTCGCGCCGCAAATGAATGCCTTTGCCA
TCGCTTTAACGCTTAAAAGCGGCGTGACCTTCTTTATTATTTTGATCTATTTCGCGCCGCTGTTGCCTGAGATATTTCGT
CAATATTGGCTGTTGCCCTCTCAATTGGAGATATGGCTGAGTAGCGGGCTATCGCCTGGGGAGGAGAATGAGTAA

Protein sequence :
MILPLWSSLFEWLITLAVVSARITPAFFLLPFFSASVLSLTVRTPVIFFIGAALWPYSFGAMASLDGARIADILLREVAI
GLLLAILLALPFWVMHGLGALIDYQRGALLSSAYDPISGVDTSELANLFNLFFAAVFLQGGGLTLLLEVFLGSYQLCDPL
EPSLPSLAKVTTLLQTMATRILILSSPVLVVLLLIEISLGLLSRFAPQMNAFAIALTLKSGVTFFIILIYFAPLLPEIFR
QYWLLPSQLEIWLSSGLSPGEENE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaR AAS66867.1 SpaR Not tested SSR-2 Protein 3e-83 100
spaR NP_806491.1 virulence-associated secretory protein Virulence SPI-1 Protein 4e-31 48
spaR NP_461809.1 needle complex export protein Virulence SPI-1 Protein 1e-30 48
spaR NP_457282.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 4e-31 48
spaR YP_217807.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 8e-32 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG2082 YP_455762.1 type III secretion apparatus SpaR VFG0549 Protein 6e-31 48
SG2082 YP_455762.1 type III secretion apparatus SpaR VFG1014 Protein 1e-19 45