Gene Information

Name : SG1853 (SG1853)
Accession : YP_455533.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Resistance
Product : cation transport ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 3144127 - 3146469 bp
Length : 2343 bp
Strand : +
Note : -

DNA sequence :
ATGAACGGCAACGAGAAATTACCCCGTCGCGCCGCGAAAATTACCACGGCACGCCCCCTTGCCGCTGGTGCTACGATTGC
GGATGGCGTCCAGACCCGCGGCAACACCTGCTGCGGCGCCCGCCCGCAGGGTGCCGGCGCCACGCGAAGCGAGCCGCGAC
AAGAACCCCTCGCGGCGGCGCGGGAAGTGGACGGCGACGTGCGCACGCCTATTCGTATCATGCAGATGGACTGCCCCACC
GAAGAAGGGATGATCCGCAAGAAACTCGCGTCTCTGCCTGCGGTAACGGCGATGGAATTCAATCTTATGCAGCGGGTGCT
GATGGTGGTCCATCGCCCGGACAGCCTTGACAGCATCCTTGCAGCAATACGGTCCCTGGGTTTTACCCCGCAGATCGCGG
CGGCCGACGCGCCGCTCGCCGACGACGATCTGCCGCGTCAACGCCGCTGGCCGCTGGTGCTGGCCGCTATCGCCGCCTTT
GCCTCGGAAATCAGCCACTGGTTGTCGTGGCCGGACGGAATCAGCGCCGTGCTAGCATTGCTGGCGGTCGTCGCCTGTGG
CCTGACGACCTATAAAAAAGGCTGGCTGGCCCTGCGGCAGGGGACAATGAATATCAATGCGCTGATGAGCATCACCGTCA
CCGGCGCGCTGTTAATCGGGCAATGGCCTGAGGCGGCGATGGTTATGGTCTTGTTTACCCTCGCCGAACTGATAGAAGCC
CGTTCCCTCGATCGCGCCCGCAACGCCATCAGCGGTTTACTGCAAAGCGTGCCGGCGACCGCCAGCCAGCAGCAGGCCGA
CGGCAGTTGGCAAGAGGTTGAGGTCGATACGGTACCGGTCGGCAGCCTGCTGCGGGTCAAACCCGGCGAACGCGTCGCCC
TTGACGGCACGGTTGAGCAAGGAAATTCAACGGTGGATCAGGCGTCTATCACCGGTGAGAGCCTGCCGGTGGAAAAACGG
CCGGGGGATACGGTCTTTGCCGGCACGCTCAATCAGGCCGGTTCATTTAGCTACCGGGTCACCGCCACCATCGGCGATAC
AACCCTGGCCCGTATCATCCACGCCGTCAGCGAAGCGCAGGGGAACCGCGCGCCGACCCAGCGTTTTGTCGACCGTTTCG
CGCGTATCTATACCCCTCTGATCCTAGTTCTCGAGGTCTTGGTAGCGCTTTTGCCGCCGTTATTGCTGGGCGGCGGTTGG
TATGAGTGGATCTACAAAGCTCTGGTGATGCTGGTGATCGCCTGTCCGTGCGCTCTGGTCATTTCAACGCCGGTGACTAT
CGTCAGCGGTCTAGCCGCCGCGGCGCGGCAGGGTATTTTGATTAAAGGCGGCGTTTATCTGGAAAAAGGGCGGAGCCTGC
GCTGGCTGGCGCTCGATAAAACCGGCACGTTGACGCACGGGAAACCCATCCTGACCGATCGCCACACCTTCGGCGTACGG
GACGCAGAGGCGCTCTATCAACTGGCGGCCGGGCTGGCTTCCCGCTCCGATCATCCGGTCTCGCAGGCCATTATCCAGGC
GGCCGAACGGGAAGGCAACGCTCCCGTCAGGGTAACCGATTTCACAGCCCTGCCCGGCCGCGGTATCACGGGAGTGACGG
CGGACAGCCAGTGGTATCTCGGCAACCGGCGGCTAGCGGATGAACTGGGGCTGTCAACCGACGTCCTCGATCCGCGGGCA
GCCGCGCTGGAACAGCAAGGCAAAACCCTGGTAATGCTGATGGGCGAGGGAAAAGTACAGGCGCTGTTTGCGGTGGCGGA
TACGCTGAAATCACATAGCCGCGCAGCCATCGCACAATTGCACCAGGCCGGCGTCAAAATATTGATGCTCAGCGGCGACA
ACACGCACACCGCCAGGGCAATTGCGGCGCAGGCGGGAATCGATGAAGCCTATGGCGATCAATTGCCGGAAGACAAACTG
CAAAAGATAAACCAGCTGGCGGACCGGGGCACGGTAGGAATGGTAGGCGATGGCATCAATGATGCGCCGGCGCTGGCCCG
GGCGGATATCGGTTTCGCTATGGGCGCGTTGGGCAGCGACACAGCCATTGAAACCGCGGATGTCGCCCTGATGGATGACG
ATTTGCGCAAGGCTGCGCAGTTTATCCGGCTGTCGCGTGCCACCCACCGCATTCTGATACAAAATATTGCGCTGGCGTTG
GGCATCAAGGCAGTGTTTTTACTATTGACGTTGGCAGGCGCGGGCACCATGTGGATGGCGGTCTTCGCCGATGTGGGCAC
CAGCCTGCTGGTGGTGGCCAACGGCCTGCGGCTGCTGCGCCAGGCGCCGCGCAGTCGGCCAACACCCGCACACGGTAACG
CGGCAGAGCAGCCGCTACTATAA

Protein sequence :
MNGNEKLPRRAAKITTARPLAAGATIADGVQTRGNTCCGARPQGAGATRSEPRQEPLAAAREVDGDVRTPIRIMQMDCPT
EEGMIRKKLASLPAVTAMEFNLMQRVLMVVHRPDSLDSILAAIRSLGFTPQIAAADAPLADDDLPRQRRWPLVLAAIAAF
ASEISHWLSWPDGISAVLALLAVVACGLTTYKKGWLALRQGTMNINALMSITVTGALLIGQWPEAAMVMVLFTLAELIEA
RSLDRARNAISGLLQSVPATASQQQADGSWQEVEVDTVPVGSLLRVKPGERVALDGTVEQGNSTVDQASITGESLPVEKR
PGDTVFAGTLNQAGSFSYRVTATIGDTTLARIIHAVSEAQGNRAPTQRFVDRFARIYTPLILVLEVLVALLPPLLLGGGW
YEWIYKALVMLVIACPCALVISTPVTIVSGLAAAARQGILIKGGVYLEKGRSLRWLALDKTGTLTHGKPILTDRHTFGVR
DAEALYQLAAGLASRSDHPVSQAIIQAAEREGNAPVRVTDFTALPGRGITGVTADSQWYLGNRRLADELGLSTDVLDPRA
AALEQQGKTLVMLMGEGKVQALFAVADTLKSHSRAAIAQLHQAGVKILMLSGDNTHTARAIAAQAGIDEAYGDQLPEDKL
QKINQLADRGTVGMVGDGINDAPALARADIGFAMGALGSDTAIETADVALMDDDLRKAAQFIRLSRATHRILIQNIALAL
GIKAVFLLLTLAGAGTMWMAVFADVGTSLLVVANGLRLLRQAPRSRPTPAHGNAAEQPLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 61
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 1e-115 45
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 1e-115 45
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-112 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1853 YP_455533.1 cation transport ATPase BAC0298 Protein 0.0 63
SG1853 YP_455533.1 cation transport ATPase BAC0455 Protein 4e-91 42
SG1853 YP_455533.1 cation transport ATPase BAC0461 Protein 3e-84 42