Gene Information

Name : SG1519 (SG1519)
Accession : YP_455199.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2561774 - 2562640 bp
Length : 867 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCTTTCAGACACTTTACTGATGCCCTTTCACTTTGTTTTCATGAATAATGCGTTCTTGATTGTGCTGCTGATTGC
TGTTCCCGCCTCGCTGCTGTCATGTCTGATGGTCTTGAAGGGATGGGCGCTCATGGGCGACGCCATGAGCCATGCGGTAT
TCCCGGGCGTCATCGTTGCCTATATGGTCGGCCTGCCGCTGGCGGTCGGCGCTTTCGTGGCGGGTCTGGTGTGCGCCATG
ACGACCGGATTTTTGAAAAACAACTGTCGAATCAAGCATGATACGCTAATGGGCATCGTATTTTCCGGTATGTTCGGCAT
GGGGCTGGTGATGTATGTCAAAGTGCAATCCACGCTTCATCTACAGCATATATTATTTGGCGATATGCTGGGGATTGGTG
CGGATGATCTTATCGAGGCGGCGCTCACCTCTGCCGCCACGGTGCTGTTTATCGCCGTAAAATGGAAAGATCTGGTACTC
CAAACCTTTGACGCGGTCCAGGCCAAAGCCTCCGGACTCAATGTGCGCCTGTTACATTACGGCCTGCTGTGCTTCCTGGC
GCTGACGATCGTAGCGGCGCTGAAAGCGGTGGGGATTATTTTGTCGGTCTCGTTATTGATTGCCCCCGGGGCGATAGCCT
TCCTCATCACCCGCAAATTCTGGTCGATGATGCTGGCCTCCGTCGCCATTGCCATCACCAGCAGCTTCTTGGGCGTGTAC
GTTTCCTTCTTCCTGGACAGCTCGCCGGGGGCGACGATCGTATTGTTATTCACCCTGATGTTTGCCGCAGTCTTTTTCAT
CAACGGTTTCCGCAATTACCGTCTGCGCTGTGCGGCATATAACCCCCACCGGACGCCCCGCCGCTAA

Protein sequence : 
MSLSDTLLMPFHFVFMNNAFLIVLLIAVPASLLSCLMVLKGWALMGDAMSHAVFPGVIVAYMVGLPLAVGAFVAGLVCAM
TTGFLKNNCRIKHDTLMGIVFSGMFGMGLVMYVKVQSTLHLQHILFGDMLGIGADDLIEAALTSAATVLFIAVKWKDLVL
QTFDAVQAKASGLNVRLLHYGLLCFLALTIVAALKAVGIILSVSLLIAPGAIAFLITRKFWSMMLASVAIAITSSFLGVY
VSFFLDSSPGATIVLLFTLMFAAVFFINGFRNYRLRCAAYNPHRTPRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-80 61
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-80 61
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-80 61
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-80 61
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-80 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1519 YP_455199.1 iron ABC transporter permease BAC0352 Protein 1e-80 61
SG1519 YP_455199.1 iron ABC transporter permease BAC0442 Protein 2e-60 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1519 YP_455199.1 iron ABC transporter permease VFG0528 Protein 1e-80 61