Gene Information

Name : SG1518 (SG1518)
Accession : YP_455198.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2560917 - 2561771 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence :
ATGCTTGACGTATTACTTGAGCCCTTCACCTACGACTATATGCGCAATGCCATGTGGGTTTCCGCTTTGGTCGGTGGCGT
CTGCGCCTTTCTTTCCTGTTATCTGATGCTAAAAGGATGGTCCCTGATGGGAGATGCGCTGTCGCATTCCATCGTCCCAG
GCGTCGCCGGCGCCAGGATGTTAGGCATGCCGTTATCGGCAGGCGCTTTTCTCTCCGGCGGCCTAGCGGCCTATGCCATG
CTCTTTATCAATCAACGAACCAAGTTGAAAGAAGATGTCATTATCGGTCTGACGTTCTCGTCCTTCTTTGCGTTCGGGCT
CTTTATGCTGTCGCTGCGTCCTGCCGCCATGAATATCGAAACGATTATGCTGGGCAACCTGCTGGTCATTGCACCGTCCG
ATATCGTGCAATTGGCTCTAATTGGCTTCATCTCGCTGGCCATATTGCTGCTTAAGTGGAAAGACCTGATGGTGGTGTTC
TTTGATGAGAACCACGCCCGCTCCGTCGGTATCAATACGGTAGGGCTGAAATGTTTGTTCTTCACCCTGCTGGCCGCCTC
TACGATTGCCGCGCTGCAAACGGTCGGTGCCTTTCTGGTCATTTGCATGATTGTCACCCCCGGTGCTACCGCCTGGTTGC
TGACCGATCGGTTCCCGCGTTTGCTGATGGTGTCAGTGCCGATGGGGGCGCTAACCAGCTTCGTCGGCGCCTATAGCAGT
TACTTTCTGGACGGCGCCACGGGCGGGTTGATCGTTTCACTGCAAACCCTCCTCTTTTTGCTGGCATTCGTTCTGGCGCC
GCGGCACGGTTTATTGGCTTCCCGTAAACGTGCCCGAATTGAATTAAGGAAATAA

Protein sequence :
MLDVLLEPFTYDYMRNAMWVSALVGGVCAFLSCYLMLKGWSLMGDALSHSIVPGVAGARMLGMPLSAGAFLSGGLAAYAM
LFINQRTKLKEDVIIGLTFSSFFAFGLFMLSLRPAAMNIETIMLGNLLVIAPSDIVQLALIGFISLAILLLKWKDLMVVF
FDENHARSVGINTVGLKCLFFTLLAASTIAALQTVGAFLVICMIVTPGATAWLLTDRFPRLLMVSVPMGALTSFVGAYSS
YFLDGATGGLIVSLQTLLFLLAFVLAPRHGLLASRKRARIELRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-88 76
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-88 76
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-88 76
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-88 76
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-88 76
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-38 41
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-38 41
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-38 41
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-38 41
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1518 YP_455198.1 iron ABC transporter permease BAC0351 Protein 2e-88 76
SG1518 YP_455198.1 iron ABC transporter permease BAC0441 Protein 3e-69 63
SG1518 YP_455198.1 iron ABC transporter permease BAC0442 Protein 1e-35 42
SG1518 YP_455198.1 iron ABC transporter permease BAC0352 Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1518 YP_455198.1 iron ABC transporter permease VFG0527 Protein 2e-88 76
SG1518 YP_455198.1 iron ABC transporter permease VFG0528 Protein 9e-39 41