Gene Information

Name : SG1517 (SG1517)
Accession : YP_455197.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2560100 - 2560909 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence : 
ATGATTGAGCGCGGCGAATCCAACCTAAATGTTGCGCCGGCGGGCGCAACAGCACTTGATGTCAGCCGGGCGACGGTGAT
TTACCGCAACGGCCATCTGGCGTTAAAACAGGCGACATTTGCTATCCCTCATGGAGTGATTGCGGGTCTGGTCGGTGTCA
ACGGTTCCGGCAAATCGACGCTATTCAAATCAATTATGGGGTTTATTACCCTGGCCAGCGGCGAAATCAGCGTCATGGGC
CACCCGCCGGCGAAGGCGTTGAAACGGCGTCTTGTCTCCTACGTTCCCCAGTCGGAAGAAGTGGACTGGAACTTTCCCGT
GCTGGCGGAGGATGTGGTCATGATGGGCCGCTACGGCCATATGAGAATGATGCGTATCGCGCGTCAGGCAGACAGGGATG
CCGTGGCATGCGCTTTGGAGCGTGTTGGCATGAGCGGGCTGCGAAAACGTCAGATTGGTGAGCTCTCCGGCGGCCAGCGT
AAACGGGTTTTTCTGGCGCGGGCCATTGCCCAGGATGGCCAACTGATACTGTTGGATGAACCCTTTACGGGTGTCGATCT
GAAAACGGAAAAACAGATCGTCACCCTGCTGCGCGGTCTGCGCGATGAAGGCCGGACCATCCTGGTTTCCACTCATAATC
TCGGTTCGGTGCCGACGTTTTGCGACATGACCGTATTGGTAAAAGGGACCGTGATGGCTTGTGGACCGACCCGGGAAATC
TTTACCCGAAGCAATATCGAGCGTGCTTTTGATGGCGCGCTTCATCAGCTTGCCTGGGACGATAATCTGTTGACGCCAGA
AGCCTGCTGA

Protein sequence : 
MIERGESNLNVAPAGATALDVSRATVIYRNGHLALKQATFAIPHGVIAGLVGVNGSGKSTLFKSIMGFITLASGEISVMG
HPPAKALKRRLVSYVPQSEEVDWNFPVLAEDVVMMGRYGHMRMMRIARQADRDAVACALERVGMSGLRKRQIGELSGGQR
KRVFLARAIAQDGQLILLDEPFTGVDLKTEKQIVTLLRGLRDEGRTILVSTHNLGSVPTFCDMTVLVKGTVMACGPTREI
FTRSNIERAFDGALHQLAWDDNLLTPEAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-70 66
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-71 66
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-71 66
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-71 66
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-70 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1517 YP_455197.1 iron ABC transporter ATP-binding protein BAC0350 Protein 2e-71 66
SG1517 YP_455197.1 iron ABC transporter ATP-binding protein BAC0440 Protein 1e-63 57
SG1517 YP_455197.1 iron ABC transporter ATP-binding protein BAC0400 Protein 5e-41 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1517 YP_455197.1 iron ABC transporter ATP-binding protein VFG0526 Protein 2e-71 66