Gene Information

Name : SG1516 (SG1516)
Accession : YP_455196.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2559196 - 2560107 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTAGAGCAAAATGTTTTATGTCCGCCGTGACACTATCGCTGCTGCTGACCTCGTTATCCGTACCCGCAGCCGA
TAAATTTAAAGTAGTCACCACATTTACCGTGATTGCGGATATGGCAAGAAATGTTGCCGGTGATGCAGCAGATATCGAAT
CTATCACCAAGCCCGGGGCAGAAATTCATGAATACCAACCGACACCGGGGGATATCCAGCGTACCCAAGGCGCGCAATTG
TTACTGTCGAACGGGCTGGATCTTGAACGCTGGTTCGAAAAATTCTATCAGCAGTTACATAATGTGCCAGACGTCGTCGT
GTCGCAAGGGGTGGTCCCCATTGGTATCGTCGAGGGGCCGTACAGCGGTTTACCGAATCCGCATGCCTGGATGTCCCCGG
ATAATGCCATCATTTATGTCAACAATATCCGCGATGCGCTAATTAAATATGATCCCGCGCACAGCCAAACCTATAAGGAA
AATGCGGAAGTCTACAAGCAGAAAATTAATGCTGAAATCGCCCCGGTAAAAGAAAAACTGGCGCAAATCCCCGCTGCGCA
ACGTTGGCTGGTGACGAGTGAAGGTGCCTTTTCCTACCTCGCCCGGGACTTCGGGCTGAAAGAGCTCTATCTCTGGCCGG
TTAACTCCGATCAGGAAGGCACACCGCAGCAAATTCGCAAAGTTGTGGACACCGTCAAAAAATACCGTATCCCGGCCGTA
TTTAGCGAGAGCACCGTTTCCGATAAACCGGCACGTGAAGTCGCACGTGAGACCGGCTCCCATTATGGCGGCGTTTTGTA
TGTGGATTCCTTAAGCGAGCCCACAGGCCCGACACCAACCTATCTTGATCTGCTGCGCGTCACGGCGGATACCGTGGCGG
AAGGCATGACCGCCGGGGTTAAGCATGATTGA

Protein sequence : 
MKIRAKCFMSAVTLSLLLTSLSVPAADKFKVVTTFTVIADMARNVAGDAADIESITKPGAEIHEYQPTPGDIQRTQGAQL
LLSNGLDLERWFEKFYQQLHNVPDVVVSQGVVPIGIVEGPYSGLPNPHAWMSPDNAIIYVNNIRDALIKYDPAHSQTYKE
NAEVYKQKINAEIAPVKEKLAQIPAAQRWLVTSEGAFSYLARDFGLKELYLWPVNSDQEGTPQQIRKVVDTVKKYRIPAV
FSESTVSDKPAREVARETGSHYGGVLYVDSLSEPTGPTPTYLDLLRVTADTVAEGMTAGVKHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-97 72
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-97 72
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-97 72
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-97 72
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-97 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1516 YP_455196.1 iron ABC transporter substrate-binding protein BAC0349 Protein 8e-98 72
SG1516 YP_455196.1 iron ABC transporter substrate-binding protein BAC0439 Protein 2e-85 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1516 YP_455196.1 iron ABC transporter substrate-binding protein VFG0525 Protein 7e-98 72