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Name : SG1308 (SG1308) Accession : YP_454988.1 Strain : Sodalis glossinidius morsitans Genome accession: NC_007712 Putative virulence/resistance : Virulence Product : secretion system apparatus protein SsaU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 2173283 - 2174347 bp Length : 1065 bp Strand : + Note : member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli DNA sequence : ATGGGTGAGAAAACTGAAAAACCGACCGAAAAGCGACGTCGCGACCGCCGTAAAGAAGGACAGGTGATAAAAAGCAATGA AATCACCTCCGGCGTTCAACTGGCCGCGATACTCCTTTTCTGGCACCTGTTCGCCGAGGCGGTGATAGAGCGGACATCGA CGCTTATCGTCTTGTCCATAAGCCTGATTAATCGACCTTTCCTGTTTGCCTTCAATCAGCTGTTGCATGTTGTGCTATCG TCGGCCGGATTGTTGTTCGCCTTATTTGGCGGTATGTTAGCGCTAGCCACCGTTGGCAGCGTGCTGCTACAGATAGGGTT CGTCCTGGCCAGTAAAGCCGTGGGCATCAAGGGACGTCGCATTAATCCGGTCAGTAATCTCAAACAAATTTTTTCGCTCC ACAGCCTGGTGGAATTGTGTAAATCCACCGGTAAGGTCGTGGTGTTGACGCTGATTTTTGCCGGCCTGTTTTATTATTAT GCAACGACATTTCAGGCGCTGCCGTTTTGCAATAGCCGTTGTGCGTTGCCGCTGTTTACCACTTTCACTCGCTGGATGTG GTTTGGATTAATCGGTTTTTATATTGTCCTTGGAGTACTCGATTACGCTTTTCAGGCCCATAACACCCTGAAGCAGCAAC GAATGAGCAAGGAGGAAGTAAAACAGGAATATAAGGATGCGGAAGGCGATCCCTACATGAAACAACGCCGGCACGAAATG CAGCATGAGATCCAAAGCGGTAGTCTTGCGCACAATGTTAAACGATCGGCCGTCGTGATACGTAACCCGACCCATATTGC GATTTGTCTGGGGTATCATCCAATCGATATGCCGGTGCCGCGTGTGCTGGACAAAGGTACGGCCGAACGTGCAGGACAAA TTGTTGACCTGGCACAACGCGCCGCCGTGCCGGTTGTGGAAAATATCCCTCTCGCGCGGGCGCTTTTCCAGCATGTCGGC TGCGGCGACAGAATACCGGAAACGCTGTTTGAACCGGTAGCGGTACTGTTGCGTATGGTTCTGGAAATTGACTATCATTG CGATGAAAAAACGGTAAAATCATGA Protein sequence : MGEKTEKPTEKRRRDRRKEGQVIKSNEITSGVQLAAILLFWHLFAEAVIERTSTLIVLSISLINRPFLFAFNQLLHVVLS SAGLLFALFGGMLALATVGSVLLQIGFVLASKAVGIKGRRINPVSNLKQIFSLHSLVELCKSTGKVVVLTLIFAGLFYYY ATTFQALPFCNSRCALPLFTTFTRWMWFGLIGFYIVLGVLDYAFQAHNTLKQQRMSKEEVKQEYKDAEGDPYMKQRRHEM QHEIQSGSLAHNVKRSAVVIRNPTHIAICLGYHPIDMPVPRVLDKGTAERAGQIVDLAQRAAVPVVENIPLARALFQHVG CGDRIPETLFEPVAVLLRMVLEIDYHCDEKTVKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaU | NP_805093.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 4e-96 | 59 |
| ssaU | CAA68202.1 | secretion system apparatus, SsaU | Virulence | SPI-2 | Protein | 6e-96 | 59 |
| ssaU | NP_460387.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 9e-96 | 59 |
| ssaU | NP_456106.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 4e-96 | 59 |
| ssaU | YP_216430.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 3e-95 | 58 |
| YPO0273 | YP_002345355.1 | secretion system apparatus protein SsaU | Virulence | Not named | Protein | 8e-77 | 51 |
| escU | AAC38372.1 | EscU | Virulence | LEE | Protein | 1e-55 | 41 |
| escU | YP_003236100.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 2e-55 | 41 |
| escU | AAC31525.1 | L0046 | Virulence | LEE | Protein | 1e-55 | 41 |
| escU | NP_290280.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 2e-55 | 41 |
| escU | ACU09470.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 1e-55 | 41 |
| ECs4580 | NP_312607.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 2e-55 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SG1308 | YP_454988.1 | secretion system apparatus protein SsaU | VFG0522 | Protein | 4e-96 | 59 |
| SG1308 | YP_454988.1 | secretion system apparatus protein SsaU | VFG0718 | Protein | 8e-56 | 41 |
| SG1308 | YP_454988.1 | secretion system apparatus protein SsaU | VFG0824 | Protein | 7e-56 | 41 |
