Gene Information

Name : SG1307 (SG1307)
Accession : YP_454987.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2172520 - 2173290 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGCGCTTACGGACGGTCTGGTGACGGTGGCGTTCACGCTTATCCGACCTTTGGGCTTGACCTTGCTCTTCCCGCT
GCTTAATACCCGCAGTCTCGGTAGCGCGCTGATTAGAAACGGCGTGTTATTGGCGCTGATTATTCCCATGTTGCCACTGG
TATATAAACAGGCGGCGCCATTGCGCGGTTGGGGGTTGCTCGAACGAGTGCCGGGAGAGCTGCTCATTGGTGTTATCCTC
GGGTTTTGTGCCGCCATTCCATTCTGGGCGGTGGATATGGCAGGCTTTCTTATCGATACGCTGCGCGGTGCCACGATGGG
TTCTGTTTACAATCCGTCCATGGCGATGCAAACTTCATTGTTTGGCCTGTTGTTCAGCCAATTTCTCTGCGCGCTGTTCT
TTCTGGGGGGCGGCATTAATCTATTGCTCAGCGCGCTGTATGACTCTTATCGCGCCTTCCCGCCGGGTACGACGCTGGCG
CTGGACCGCAGGCTGTTTGATTTCATTCTCACGCAGTGGCAACTACTCTATTGTTTGTGCCTGAGTTTTTCGCTGCCGGC
GGTGCTCAGTATGATATTGGCGGATTTGGCGCTGGGCTTAATCAACCGTTCCGCACGGCAGTTAAACGTGTTCTTTCTCT
CCATGCCGATCAAAAGCGCATTGGCGCTTCTCCTGCTGCTGGTGTCATTGCCTTATGCCTTCCATCATTACTTGCAGGAG
ACGGAAACGCTGTATCAGGCGTTGACCAAAGCGTGGCTCTGGCATGGGTGA

Protein sequence : 
MIALTDGLVTVAFTLIRPLGLTLLFPLLNTRSLGSALIRNGVLLALIIPMLPLVYKQAAPLRGWGLLERVPGELLIGVIL
GFCAAIPFWAVDMAGFLIDTLRGATMGSVYNPSMAMQTSLFGLLFSQFLCALFFLGGGINLLLSALYDSYRAFPPGTTLA
LDRRLFDFILTQWQLLYCLCLSFSLPAVLSMILADLALGLINRSARQLNVFFLSMPIKSALALLLLLVSLPYAFHHYLQE
TETLYQALTKAWLWHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-52 59
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-52 59
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 2e-51 58
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-51 58
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 6e-52 58
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 1e-42 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1307 YP_454987.1 type III secretion apparatus VFG0521 Protein 1e-51 58