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Name : SG1306 (SG1306) Accession : YP_454986.1 Strain : Sodalis glossinidius morsitans Genome accession: NC_007712 Putative virulence/resistance : Virulence Product : type III secretion apparatus Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 2172254 - 2172523 bp Length : 270 bp Strand : + Note : - DNA sequence : ATGAACGACGCCGCCCTGACCCATTTAGTGACGCAGCTAATGTGGATCGTGCTCATCACGTCTTTACCCGTCGTGCTAGT AGCGTCTGCCGTGGGCATTTTAGTGAGCCTGTTTCAGGCGTTAACGCAAATTCAGGATCAGACTTTACAGTTCATGATAA AGCTGCTGGCGGTGGCGATAACGTTAATGGCCAGTTATCCCTGGCTGGGCGGAATTCTGCTGGGCTATACCCGTCAGGTG TTGCTGCAAATCGGGATGCGGGGCGGATGA Protein sequence : MNDAALTHLVTQLMWIVLITSLPVVLVASAVGILVSLFQALTQIQDQTLQFMIKLLAVAITLMASYPWLGGILLGYTRQV LLQIGMRGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 1e-23 | 78 |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 2e-23 | 78 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 2e-23 | 78 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 2e-23 | 77 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-23 | 77 |
| YPO0271 | YP_002345353.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 3e-14 | 63 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 5e-16 | 54 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-08 | 52 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-04 | 49 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 6e-04 | 49 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 6e-06 | 48 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 9e-06 | 48 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 6e-06 | 48 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-06 | 48 |
| escS | AFO66341.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-13 | 47 |
| escS | AFO66401.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-13 | 47 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 2e-05 | 46 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 2e-05 | 46 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 2e-05 | 46 |
| escS | AAK26701.1 | EscS | Virulence | LEE | Protein | 1e-12 | 42 |
| escS | AAL57528.1 | EscS | Virulence | LEE | Protein | 1e-12 | 42 |
| escS | CAC81848.1 | EscS protein | Virulence | LEE II | Protein | 1e-12 | 42 |
| escS | YP_003223489.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 1e-12 | 42 |
| escS | YP_003232139.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 1e-12 | 42 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 5e-08 | 42 |
| escS | ACU09472.1 | hypothetical protein | Not tested | LEE | Protein | 1e-12 | 41 |
| unnamed | AAL06355.1 | EscS | Virulence | LEE | Protein | 1e-12 | 41 |
| escS | YP_003236102.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 2e-12 | 41 |
| escS | NP_290282.1 | hypothetical protein | Virulence | LEE | Protein | 2e-12 | 41 |
| ECs4582 | NP_312609.1 | EscS | Virulence | LEE | Protein | 2e-12 | 41 |
| escS | CAI43888.1 | EscS protein | Virulence | LEE | Protein | 3e-12 | 41 |
| escS | AAC38370.1 | EscS | Virulence | LEE | Protein | 1e-12 | 41 |
| escS | AAC31527.1 | L0048 | Virulence | LEE | Protein | 1e-12 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG0520 | Protein | 5e-24 | 78 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG0395 | Protein | 4e-16 | 50 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG0187 | Protein | 7e-10 | 50 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG2132 | Protein | 1e-08 | 46 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG0043 | Protein | 4e-08 | 44 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG1772 | Protein | 4e-09 | 44 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG0716 | Protein | 6e-13 | 41 |
| SG1306 | YP_454986.1 | type III secretion apparatus | VFG0826 | Protein | 6e-13 | 41 |
