Gene Information

Name : SG1305 (SG1305)
Accession : YP_454985.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4790
EC number : -
Position : 2171610 - 2172257 bp
Length : 648 bp
Strand : +
Note : part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response

DNA sequence : 
ATGTCATTACCTGACTCTCCCTGGCAGTTGATAATACTGCTTGTGGTCCTTTCCCTGCTGCCGCTGGCGGTTGTCATGGG
AACCTCATTTCTGAAACTGGCGGTGGTGTTGTCTATTTTACGCAATGCGCTGGGGATCCAGCAGGTGCCGCCTAACATGG
CGCTGTACGGCCTGGCGCTTATCCTGTCGCTATTCATCATGGCCCCGACCGCATTAGCGGTCAAAGCGCAGTGGCATCCG
GTGGCAGCGCCCGGTGATACGCCCTGGGCCAGCGGCTGGGACGGTAAGGCGCTCATGCCCTATCGCCAATTTTTACGCCG
CAACGCCGACGAAAAAGAGATACGCTATTTCCACCAACTGGTAACGAAAACCTGGCCGGAAGAGGCGCGCCGGCGGGTCA
GGCCGGACTCGCTCCTGATCTTGTTGCCGGCGTTTACCGTGAGTCAGCTCAGCCAGGCTTTCCGTATCGGCCTGTTAATT
TATCTCCCCTTTTTGGCCATCGATCTGCTGGTCTCGAATGTGTTATTGGCGATGGGAATGATGATGGTCTCGCCGATGAC
GATCTCCTTGCCTTTCAAGCTGCTGATTTTCATGCTGGCGGGCGGCTGGGATTTGATTTTATCGCAGCTGGTGCAAAGCT
TTTCATGA

Protein sequence : 
MSLPDSPWQLIILLVVLSLLPLAVVMGTSFLKLAVVLSILRNALGIQQVPPNMALYGLALILSLFIMAPTALAVKAQWHP
VAAPGDTPWASGWDGKALMPYRQFLRRNADEKEIRYFHQLVTKTWPEEARRRVRPDSLLILLPAFTVSQLSQAFRIGLLI
YLPFLAIDLLVSNVLLAMGMMMVSPMTISLPFKLLIFMLAGGWDLILSQLVQSFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 5e-74 78
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 3e-74 78
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 5e-74 78
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 2e-73 77
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 2e-73 77
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-57 62
lscR AAO18040.1 LscR Virulence TTSS locus Protein 5e-48 54
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 2e-44 53
escR AAK26700.1 EscR Virulence LEE Protein 2e-44 53
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 2e-44 53
escR AAL57527.1 EscR Virulence LEE Protein 2e-44 53
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 2e-44 53
escR CAC81847.1 EscR protein Virulence LEE II Protein 2e-44 53
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 2e-44 53
escR CAI43889.1 EscR protein Virulence LEE Protein 2e-44 53
escR AAC31528.1 L0049 Virulence LEE Protein 1e-44 53
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 1e-44 53
unnamed AAL06354.1 EscR Virulence LEE Protein 4e-45 53
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 2e-44 53
escR AAC38369.1 EscR Virulence LEE Protein 1e-43 52
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-43 51
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-43 51
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-34 48
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-34 48
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-34 48
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-34 47
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 2e-30 46
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 9e-29 46
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 9e-29 46
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 2e-30 46
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 1e-36 46
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-29 46
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-29 46
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-37 44
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 1e-37 44
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-37 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-37 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-37 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-37 43
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-37 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1305 YP_454985.1 type III secretion system protein VFG0519 Protein 2e-74 78
SG1305 YP_454985.1 type III secretion system protein VFG0188 Protein 4e-50 56
SG1305 YP_454985.1 type III secretion system protein VFG0394 Protein 4e-47 53
SG1305 YP_454985.1 type III secretion system protein VFG0827 Protein 7e-45 53
SG1305 YP_454985.1 type III secretion system protein VFG0715 Protein 6e-44 52
SG1305 YP_454985.1 type III secretion system protein VFG0044 Protein 4e-41 49
SG1305 YP_454985.1 type III secretion system protein VFG2338 Protein 2e-29 43
SG1305 YP_454985.1 type III secretion system protein VFG1259 Protein 4e-31 43