Gene Information

Name : SG1298 (SG1298)
Accession : YP_454978.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion apparatus
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2165015 - 2166001 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACGACCGAGGGGATACTGTCCCCGGCCTCTATGCAGGATGCACACGCCCGGCTGGTGCCGGAGGAGCGCAAGAT
GGCACTGCAGGAGATGGCGCTGCTTGAGTTGGAACAGACCTCAAGCAACGCCCTGTCCGAAACGCTGGAAGATATGGGCA
TGGCGCTGGCCGGACGCTTGCTCGGCCGTAAAGACAGGGGATCGGCCGACCGCCAGACGCGCAAGCAGAAAGCGCTTATC
AAGCTGGTTCAAAACAGCTGGGAACCGGGCGGTGGCCTGGCACTCCTGCTGGCGATGGCGCCGCAGGAGTGCCAGGCGCT
AGAAATTGCGCGACAAATCGCCACCTTATCATCCTACCTGGCGCAGGACGCATTAAGCCAGCGCCGCAAACAGGCGCTCA
GCGCCAAACTGGCGGCGCTGATGGAACAGCACGGTTGGGAAACCACGCTGTTCGCCATGCTGGAAATGGCGCAGGTCGAT
CCTGCTACGCTGCGGCCGATCACACACTTACTGCAGCAGGCGCTGGATGAACCGGAAGTCTCGCTGACGGAATGGTTCCG
ACGCATCGCTGGCTGGACGGCACGACGTCAGCGGTTGCGCTTGTTGTTGCGGGTGATGGCTTTTGAACTTGCCGCCTGCC
TTCCGGGGCAACAGCAGCAGAGGTTGGCGGCCGTGCTACAGCGCCTGCGCCGGCTGTCGTTGTTTCTGGGTCTGGAGAAC
GAAAGCCGACGTATCGAAGGATTATGCCGTTTGCCGGCAGAGACGTTACTGCCGCTCGTCATTGAAATCGTTGGCGAGAA
CTGGCTATTTGCCTCCTGGCTGGATGAGCGGCTTACGCCGTTAACCCCCTCCGGCGCGCTGCGTAATCGCCTGCTTCACC
ATCTGGTCGCGCTCTATACGCTCCTGCCCGACGGCTGTTTCATCGATGACGATCAACGCGAGCAAATCATCGACGTATTG
CGGCAGCTGGCGGCAAATCAGGTATAG

Protein sequence : 
MKTTEGILSPASMQDAHARLVPEERKMALQEMALLELEQTSSNALSETLEDMGMALAGRLLGRKDRGSADRQTRKQKALI
KLVQNSWEPGGGLALLLAMAPQECQALEIARQIATLSSYLAQDALSQRRKQALSAKLAALMEQHGWETTLFAMLEMAQVD
PATLRPITHLLQQALDEPEVSLTEWFRRIAGWTARRQRLRLLLRVMAFELAACLPGQQQQRLAAVLQRLRRLSLFLGLEN
ESRRIEGLCRLPAETLLPLVIEIVGENWLFASWLDERLTPLTPSGALRNRLLHHLVALYTLLPDGCFIDDDQREQIIDVL
RQLAANQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 1e-37 45
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 1e-37 45
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 1e-36 45
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 5e-37 45
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 4e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1298 YP_454978.1 type III secretion apparatus VFG0512 Protein 2e-37 45