Gene Information

Name : SG1290 (SG1290)
Accession : YP_454970.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2161122 - 2161550 bp
Length : 429 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGAGTTTGCACGTCAGTTGCTGAGCGAAGGCTTGCATTCGCAGCCGACTTACCTGGAGGGTAGTGCCTTACTTAT
CGGCTATCGGCTGGAGTTGTCTCCTTATCAGGTCACCTATCGGGTGGAGGGAGATGTGCTCATTCTTTGCGCCCTGCAGC
GAGAACCCAATGCTCGCAGTCGGCCTTCGCAGCTGTTCCGGCTTATGGGTGTGTTACGTCGTATTTTTCAGGCATTACGC
TGGTTGGTCAGCCTTCGGATGCTGGTCATTGCCGATGTTTTCGACCCGTTTTTGGCGCGCAAACGGCAGCAATTGGTGCA
AATATTGCTCTCGCTGGGCGCGGCGCGCATCCGAAGCAATGGCGATCTCTGGCTGGAGCTCTCCGCCTCACGCTTGCTGA
GTCGTCGCAACCTATCCGGTTTACACTGA

Protein sequence : 
MDEFARQLLSEGLHSQPTYLEGSALLIGYRLELSPYQVTYRVEGDVLILCALQREPNARSRPSQLFRLMGVLRRIFQALR
WLVSLRMLVIADVFDPFLARKRQQLVQILLSLGAARIRSNGDLWLELSASRLLSRRNLSGLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 4e-16 42
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 4e-16 42
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 4e-16 42
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 4e-16 42
sseE AAC28883.1 SseE Virulence SPI-2 Protein 3e-16 42
sseE CAA12189.1 SseE Virulence SPI-2 Protein 3e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1290 YP_454970.1 secreted effector protein VFG0503 Protein 1e-16 42