Gene Information

Name : SG1287 (SG1287)
Accession : YP_454967.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : type III secretion chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2158865 - 2159371 bp
Length : 507 bp
Strand : +
Note : -

DNA sequence : 
ATGACATCGTCCGGATATAAGGGACAACCGAATACTTGGCAAGACAAACTGGCGGTAAGTGATTTTCTCCGCCAGGGCGG
CTCGGTCTATATGCTGTTGGACAGGCAAATCGAGGAATCGCTGCAAACGCTGTTCGATTATGCCAAACAATCTGCCGCGG
CCGGCGACCAGGCTGGCGCGGCCAAACTATTCAAACTGCTGACTTTTTATGATGCTTGGTCGTTTGATTATTGGTTCCAC
TTGGGAAAATGCTGCCAGGCCCAGCGGGTATGGATTGATGCCATTTATGCCTATGGTCGCGCGGCACAAATCAAGGTGGC
CTCTCCTGAAGCGCCCTGTGCGGCGGGGGAGTGCTATCTTGCCGGCGGCAACAAGACGTACGCCCGCAAAGCTTTCCACG
CTGCGCTGCTGATTTGCGGTGAGCTTAAGCAAAACCAGGCGGTACGCCAGCGGTCAAGGGCGGGCCTGGCAGCAATGGGA
GACGGTGATGAGTCAATATCCGATTAA

Protein sequence : 
MTSSGYKGQPNTWQDKLAVSDFLRQGGSVYMLLDRQIEESLQTLFDYAKQSAAAGDQAGAAKLFKLLTFYDAWSFDYWFH
LGKCCQAQRVWIDAIYAYGRAAQIKVASPEAPCAAGECYLAGGNKTYARKAFHAALLICGELKQNQAVRQRSRAGLAAMG
DGDESISD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 5e-32 58
sscA CAA12186.1 SscA Virulence SPI-2 Protein 5e-32 58
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 7e-32 58
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 3e-31 57
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 6e-31 56
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 6e-31 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1287 YP_454967.1 type III secretion chaperone VFG0500 Protein 2e-32 58