Gene Information

Name : SG1281 (SG1281)
Accession : YP_454961.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2154643 - 2155041 bp
Length : 399 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTAATAAATTTAGAAGCGTTCCTTTTCTCGACAATATACATTTGTCGGAAAAGGGAGACATGGTGTTAATGTCGAT
TGATAATCTTCCTGCACAAGTTTATGTAAGTACGCTATCATTTTATTTCACTATTTTATTAGACGACACCAAAAATTTAT
CTGATACATCAATGCATTATTTAACATTGCTTCTGGCTGCACATCCTGACATCCATGATTATGCTGTGCAATTGACGGCG
GCCGGTATCTGGTTGGGATGTTATTATGATGAAACTTTGACAAATGAGGCGTTGGCGACGGAACTCGAAAAACAACTTGC
GCTGGCGCGTTATTTGACAAATGTTGTCGCCAGCCTTTGCATAACCAGCCAGGAAGCGCGACATGAAGTGGAATTATAA

Protein sequence : 
MLNKFRSVPFLDNIHLSEKGDMVLMSIDNLPAQVYVSTLSFYFTILLDDTKNLSDTSMHYLTLLLAAHPDIHDYAVQLTA
AGIWLGCYYDETLTNEALATELEKQLALARYLTNVVASLCITSQEARHEVEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spiC AEZ06298.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 1e-18 42
ssaB YP_216401.1 secretion system apparatus protein SsaB Virulence SPI-2 Protein 2e-18 42
spiC NP_805064.1 pathogenicity island secreted effector protein Virulence SPI-2 Protein 2e-18 41
spiC AEZ06295.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-18 41
spiC AEZ06296.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-18 41
spiC AEZ06299.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 1e-18 41
spiC NP_456135.1 putative pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-18 41
spiC AAC44300.1 SpiC Virulence SPI-2 Protein 1e-18 41
ssaB NP_460358.1 secreted effector protein Virulence SPI-2 Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1281 YP_454961.1 secreted effector protein VFG0494 Protein 6e-19 41