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Name : SG1280 (SG1280) Accession : YP_454960.1 Strain : Sodalis glossinidius morsitans Genome accession: NC_007712 Putative virulence/resistance : Virulence Product : two-component sensor kinase Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0642 EC number : - Position : 2151641 - 2154424 bp Length : 2784 bp Strand : - Note : - DNA sequence : ATGACAACAATGAAAAGACAACAGTCCTTAGTAATAAAGTTAACTATATTCATATCAATAAGTCTGATAATTATATGGCT TATATCAGTCGTCGCCGCGACCTATGTTTCATTAAATTTGACCCGGCATCGTATATTAGAAAATCTCGCTCATTTCTCCT CCTTACGCATGGAGTTGACCAATCATCGTTTTGTAGGTGCGGAACGCGACGCCCAAGCGCTCGCCCATCGCTACAAACTT TATCACGCGACGCCACTGGTAATGTTGCCCGACGAAAAAAGCGAAAGCCGTTATTTTCCCTTCAATCAGGAAAACTGCAT TCCGCCGGGCAAAAGAGAACGCGACCGCACTTTCATTCAGGTCTTCGGCACTGCGGGGCAGACGTATTATCTAGATAGTT TTATTTTGGATCGTCGCTATGGTGTATCGCTGCTGCCGCCGCGCGACCATACGCCGGACTATTTCATCCGCCAGCAGGTC GAACTAAACGCCTTCCCGCATCAACCGGCCCACGATAACCTGTTTTGGGGCAAACCCGAGTTCCTCCCCGGTACCGGCTG GAGCGTAGCCGTCGCCGCTGCCGCGCCGAATGAAGTGCTCACCGGCCTGACGGTGAAGCTAAACGATCTCCTCTCCTACG GCCACCCGGTCTTGGAGGCGGATATTAATCTCTGGCTGGACAGTGACAACCGTATCCTGCCGTTCTCGCGCGTTTCGGCG CAAACCGCCGATCGCCTGCAACCCATGCTGCAACAGTTAAAACTCAAAGAAGGCTGGCAGAAGGTACCCGGCTACATGCT GCTGCGTACGCAGCTTAAAGGCCCCGGCTGGCAACAGGTCATCTTATTTCCCCGCAACGGCGGCATGAAACGCACCCTGG ATATTATTGCGGCACAATTGCCTTTTGCGGTCGTCACGCTGTTGGTGCTGGTCGTCACGCTGTTCTGGCTATTGCATCGT TATCTGGCTCGTCCGCTCTGGGATTTCGTCGCCATCATTGGCAAAACCGGGCCTCATTCGCTTTCGGTCCGACTGCCGGA AAATCGCCACGACGAATTGGGCAGCATCGCCCATGCCTACAACTTGCTGTTAGATACCCTGCGCACCCAGTATGACAACC TGGAAAATGTCGTAGCCGAGCGGACTCGTGCCCTGAACGAAGCCAAACAGCAAGCGGAACGGGCGAACAAGCGCAAGAGC AGCCATCTCACCACCATCAGCCACGAATTGCGCACGCCACTCAGCGGCTCACTCGGGGCGCTGGAATTGTTGCAAATGAC GACCTTGACCGACAAACAATTCCAACTGGCGGATACCGCCCGACAATGCGTGTTTTCATTATTATCGATTATTAATAACT TACTGGATTTTTCACGCATCGAATCGGGGCAGCTGTCGCTGCATATCGAAGAAACGCCCTTGCTGCCGATACTCGATCAG GCGATGCATACCATTCAAGGACCGGGGCAAAGCAAGGGGTTGACGTTACGAACCTTCGTTGGCAAACAGGTGCCGCTGTA TCTGGATATAGACGGTATGCGTCTACGGCAAATTCTGGTGAATCTGCTGGGCAATGCCCTGAAATTTACCCAGTCGGGCG GCATATTCCTGAGCGTTAAACGGCGCGATCAGCAATTGATTTTTGCCGTCAACGACAGCGGCCAGGGGATCGCGCCCGAA GATCAGGAGAAAGTATTTGCGCCATTTTTCCAAAGTGAAGGAACGATGCAAGGCACGGGCCTGGGGCTCGCCATCGCCGC GAATCTCGCGAAGCTGATGGGAGGCTCGCTAACGCTCAGCAGCACGCCGGGGCTGGGGACCTGCATGTCGTTCATCATGC CGCTCAACGATCACCGTGAACCTCACCCGTTGGGCGGCCAGTTGGCCGCACCGCTGGCGCTTCATCGGCAATTGGCCGCC TGGGGCATAAGCTGTGATCCGTCCTTAGAAGAGTGCCCTTTCTCCGCCGCCGAGCTGCGTTTCCTACCGGGCAAACTGTA TGACAGAGTCATCCGCGCCTTCGCGGGAGACCTGCCCGAAACCAGTTGCAACATCCCGGTGCAACCCTGGCGGCTGCGTA TTTTGCTGGTTGATGACGCGGTGATAAACCGCGAGATCATCGGCATGATGCTGCACTCACTCGGCCAGGACGTCACCCTG GCGTGCGATGGCGCAAGAGCGCTGGCGCTCGGCCGCCAGCAGCACTTCGATCTGGTGCTGATGGATGTACGCATGCCCGA TATGGACGGCACCGCATGCGCCCGTCTCTGGCGTGAGGATGCGGAAAACCGCGACCGCGATTGCATGATAACCGCCCTCT CCGCTAATACCGCGCCGGAAGATATCGCGCGCTGTAAAGAAGCGGGCATGCGGCATTATTTGACCAAGCCGGTTACATTG GCACAGCTGGCAGATGGCATCAGCCTCGCAGCGGAATACCAGCTGCAGCGGGATATTCCGCTGCAAGAGCAGGACAGTCG GTTAACCACGTCTTTTCTGGCGGCAGGCAGCGAACGGCTGCGACAGAAAGTCCACGAATTGCTGCACTCGCTTCTCAATG AAATTGAACTTTACGTTAACGATGCGGAAAGAATCAGCACGCTGTTGCATACCCTGAAAGGGGGGTTGGGACAGGCGGGA TTGGGAGAACTGTTGTGCGACGTTGTCGATATGGAAAACCTGGTCAAACATGGCCTCCCGCTGTCCGGAGAACAGATAGC CGAATTGCGGCACGCCCTGGACAGATATCTAAGCGCCGAAAATGCATCCGCAGGGATGCGATAA Protein sequence : MTTMKRQQSLVIKLTIFISISLIIIWLISVVAATYVSLNLTRHRILENLAHFSSLRMELTNHRFVGAERDAQALAHRYKL YHATPLVMLPDEKSESRYFPFNQENCIPPGKRERDRTFIQVFGTAGQTYYLDSFILDRRYGVSLLPPRDHTPDYFIRQQV ELNAFPHQPAHDNLFWGKPEFLPGTGWSVAVAAAAPNEVLTGLTVKLNDLLSYGHPVLEADINLWLDSDNRILPFSRVSA QTADRLQPMLQQLKLKEGWQKVPGYMLLRTQLKGPGWQQVILFPRNGGMKRTLDIIAAQLPFAVVTLLVLVVTLFWLLHR YLARPLWDFVAIIGKTGPHSLSVRLPENRHDELGSIAHAYNLLLDTLRTQYDNLENVVAERTRALNEAKQQAERANKRKS SHLTTISHELRTPLSGSLGALELLQMTTLTDKQFQLADTARQCVFSLLSIINNLLDFSRIESGQLSLHIEETPLLPILDQ AMHTIQGPGQSKGLTLRTFVGKQVPLYLDIDGMRLRQILVNLLGNALKFTQSGGIFLSVKRRDQQLIFAVNDSGQGIAPE DQEKVFAPFFQSEGTMQGTGLGLAIAANLAKLMGGSLTLSSTPGLGTCMSFIMPLNDHREPHPLGGQLAAPLALHRQLAA WGISCDPSLEECPFSAAELRFLPGKLYDRVIRAFAGDLPETSCNIPVQPWRLRILLVDDAVINREIIGMMLHSLGQDVTL ACDGARALALGRQQHFDLVLMDVRMPDMDGTACARLWREDAENRDRDCMITALSANTAPEDIARCKEAGMRHYLTKPVTL AQLADGISLAAEYQLQRDIPLQEQDSRLTTSFLAAGSERLRQKVHELLHSLLNEIELYVNDAERISTLLHTLKGGLGQAG LGELLCDVVDMENLVKHGLPLSGEQIAELRHALDRYLSAENASAGMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spiR | AAC44299.1 | SpiR | Virulence | SPI-2 | Protein | 0.0 | 52 |
| ssrA | NP_460357.1 | sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 51 |
| ssrA | YP_216400.1 | secretion system regulator:sensor component | Virulence | SPI-2 | Protein | 0.0 | 51 |
| ssrA | NP_456136.1 | putative two-component sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 51 |
| ssrA | NP_805063.1 | two-component sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 51 |
| YPO0256 | YP_002345336.1 | two-component sensor/regulator | Not tested | Not named | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SG1280 | YP_454960.1 | two-component sensor kinase | VFG0493 | Protein | 0.0 | 51 |
