Gene Information

Name : SG1279 (SG1279)
Accession : YP_454959.1
Strain : Sodalis glossinidius morsitans
Genome accession: NC_007712
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2150987 - 2151622 bp
Length : 636 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAATTATAAGATCCTGCTGGTGGACGATCATGAATTGATCATCAACGGCATTATTAACCTGCTCGAACCCTATCC
GCGTTTTAAAATCGTGGCGCACATTGATGACGGTCTGGCGGTGTACAACCAGTGCCGGATACATGAACCGGACATTTTGG
TACTGGATCTCGGCCTGCCGGGCATCAATGGTTTGGACTTGATTCCCCAACTGAGATCCCGCTGGCCACAGATGTCTATT
CTGGCCTATACCGCCCATACCGAAGAATACATGGCGGTACGCACGCTGGCCGCCGGCGCCCTCGGGTATGTATTGAAAAA
CAGTCGCCAACAGGTCTTGCTGGCGGCACTCCAAACCGTGGCGGTCAACAAAAGCTATATTGATCCGGCGCTGAACCGCG
AAATGATCCATACGGCCCTGAGCATGGAAGCCGAGAATCAGGAATTGCTGACGCCGCGCGAACGACAGATTCTCAAACTT
ATCGCCGACGGTTACACCAACCGACTCATCGCCGAACAGCTGTGTATCAGCGTCAAGACGGTGGAAACCCATCGCCTGAA
TATTATGCGTAAGCTGAACGTCCACAAAGTCACGGAACTGCTGAATTGTTCCCGCCGACTGGGTTTAACTGATTAA

Protein sequence : 
MNNYKILLVDDHELIINGIINLLEPYPRFKIVAHIDDGLAVYNQCRIHEPDILVLDLGLPGINGLDLIPQLRSRWPQMSI
LAYTAHTEEYMAVRTLAAGALGYVLKNSRQQVLLAALQTVAVNKSYIDPALNREMIHTALSMEAENQELLTPRERQILKL
IADGYTNRLIAEQLCISVKTVETHRLNIMRKLNVHKVTELLNCSRRLGLTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 6e-66 70
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 9e-66 70
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 6e-66 70
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 6e-66 70
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 1e-61 69
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 5e-52 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1279 YP_454959.1 two-component response regulator VFG0492 Protein 2e-66 70