|
Name : XOO_0098 (XOO_0098) Accession : YP_449127.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : HrpD5 protein Function : - COG functional category : - COG ID : - EC number : - Position : 102751 - 103689 bp Length : 939 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGACCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCACCAGGTCGCTACACCCTGGG GAGTGATCCCCAAACCGATATACGAATAGACGATTGGCCTGGTTGCTCACTCAGTATCGAGGTAGACCAAGATGGGCAGA TCCGCTATAGCAGCGACACGTTGCCAGAAACGTCCTTCGTTGCGTTTCAGCCAGTGCGCTTCGGCCCGTTGGTGCTATGT GTTGGCGATGCTGGTGCCGATTGGCCGGACGATGTGGCGTTGCTGGAGCGGCTGCTTTCCCCAGCACCGCCACCAGCGCC GCGCACGTCCAGGCGCAACATCGTGCGTACTGCGGTGGGCGCCGTGCTAGCACTTGCAGCCGCGGCGTTGCTCCCCTCGT TGCAGCCCGCGTTTCTGTCCGATGCTGCCGCCCGGCAACATCCGGAAACTGCCGTCAATCAGGCCAAAGGTTTATTGAAG CAGCTGGGCTTTCGCGAAGCGCATGTTGCACAGGTCGGCACGCGCGTGCTGATCGAAGGCCTGGTGCCAAGCAGCGCCGA TGCTGCACGCTTGCGTGCGCAGGTGCGTCGCTATCACCCGGGCGTTGCCGTCAACGTGGCCGTGGTGGACGAGGTGGTGG CGACGCTGCGCGACACCCTGGCTGACCCCGCCCTCAGCGTACGTTACGAGGGCAATGGCGTTTTCTCGGTTTCCGGCAGC AGCGACTACGCAGAACGTGCAAGCCGCCGGATTGCCGACGTCCGCAGCGACCTGGGCCCCGAGGTCCGCGCGCTGCACGT GGAGATCAGCCAGCAAGACCCGTCCATAAAAACACCGGATAATTACGACGCGGCATTGCTCGCCGATGACCTGCACTATG TCGAAACGCCGGATGGTACCAAGCACATGACATCCCTGCCGCAGCAAGCGGCGCAATGA Protein sequence : MTMQLRVLTGTHAGARLDLAPGRYTLGSDPQTDIRIDDWPGCSLSIEVDQDGQIRYSSDTLPETSFVAFQPVRFGPLVLC VGDAGADWPDDVALLERLLSPAPPPAPRTSRRNIVRTAVGAVLALAAAALLPSLQPAFLSDAAARQHPETAVNQAKGLLK QLGFREAHVAQVGTRVLIEGLVPSSADAARLRAQVRRYHPGVAVNVAVVDEVVATLRDTLADPALSVRYEGNGVFSVSGS SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKTPDNYDAALLADDLHYVETPDGTKHMTSLPQQAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpD5 | YP_198717.1 | protein HrpD5 | Virulence | Hrp PAI | Protein | 3e-105 | 100 |
| hrpD5 | BAB07865.1 | HrpD5 | Virulence | Hrp PAI | Protein | 2e-105 | 100 |
| hrcD | YP_362150.1 | HrcD protein | Virulence | Hrp PAI | Protein | 2e-98 | 93 |
| hrpD5 | AAD21325.1 | HrpD5 | Virulence | Hrp PAI | Protein | 1e-98 | 93 |
| hrpD5 | NP_640754.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 3e-98 | 90 |
| unnamed | AAP34352.1 | HrpD5 | Not tested | Hrp PAI | Protein | 3e-98 | 90 |
| XC_3019 | YP_244087.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 2e-77 | 72 |
| hrpD5 | NP_636597.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 2e-77 | 72 |
