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Name : XOO_0096 (XOO_0096) Accession : YP_449125.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : HrcS protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 101670 - 101930 bp Length : 261 bp Strand : + Note : HrcS protein (HrpD3 protein); identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGGACCACGACGATCTAGTGCGATTTACCTCCGAAGCCTTGCTGCTCTGCCTAAAGGTGTCCTTGCCGGTGGTCGGTGT CGCTGCGCTGACCGGGCTGCTGATCGCCTTCGTCCAGGCAGTGATGTCGCTGCAGGACGCATCGATCTCGTTCGCGCTCA AGCTGGTGGTGGTGGTGGCCGCCATTGCCGTGACAGCGCCGTGGGGTGCCTCGGCCATCATGCAGTTCGGTCAGGCATTG ATGCAGGCGGCGTTCCCATGA Protein sequence : MDHDDLVRFTSEALLLCLKVSLPVVGVAALTGLLIAFVQAVMSLQDASISFALKLVVVVAAIAVTAPWGASAIMQFGQAL MQAAFP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | BAB07863.1 | HrcS | Virulence | Hrp PAI | Protein | 4e-25 | 100 |
| hrcS | YP_198719.1 | hypothetical protein | Virulence | Hrp PAI | Protein | 5e-25 | 100 |
| hrcS | YP_362152.1 | HrcS protein | Virulence | Hrp PAI | Protein | 9e-25 | 99 |
| hrcS | AAD21322.1 | HrcS | Virulence | Hrp PAI | Protein | 6e-25 | 99 |
| hrcS | NP_640756.1 | HrcS protein | Virulence | Hrp PAI | Protein | 1e-24 | 98 |
| hrcS | AAP34350.1 | HrcS | Virulence | Hrp PAI | Protein | 7e-25 | 98 |
| XC_3017 | YP_244085.1 | HrcS protein | Virulence | Hrp PAI | Protein | 1e-20 | 95 |
| hrcS | NP_636599.1 | HrcS protein | Virulence | Hrp PAI | Protein | 1e-20 | 95 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 0.022 | 41 |
