Gene Information

Name : XOO_0089 (XOO_0089)
Accession : YP_449118.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : HrpB2 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 95241 - 95633 bp
Length : 393 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence : 
ATGACGCTCATTCCTCCTGTCCAAGCGATTGCCGGCACCAGTGCTGCCGCTACCCAAGCGCTGTCGCCGGTGGCAGCGCC
CAATCAGGCGCTTGTGAATCGCTTTCAAGCGCTGATGCAATCCTCCAGCCCCTTGCCGCCCGCCATGCAGCGGGTGGGTA
GCCCGAGCATGATGAGCCGGGTGGTCGATGTGCAGAACGATGGTGTGCGTACCATCGCCGAGCATATCGATGCCTTCAGC
ATGCAGGCACCGACCATGGGGCTGCAGGAAATGGCAGCGCAGCAGATCAAGTTGATGCACGAGCTCACCATGGTCGGCTT
CAACCTCAATGTCAGCGTCGGCGTGGCGCAATCGGGAAAGAACGCCGTGCAGACGCTGGTGAAGAACCAGTAG

Protein sequence : 
MTLIPPVQAIAGTSAAATQALSPVAAPNQALVNRFQALMQSSSPLPPAMQRVGSPSMMSRVVDVQNDGVRTIAEHIDAFS
MQAPTMGLQEMAAQQIKLMHELTMVGFNLNVSVGVAQSGKNAVQTLVKNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB2 BAB07856.1 HrpB2 Virulence Hrp PAI Protein 5e-50 100
hrpB2 AAF61285.1 HrpB2 Virulence Hrp PAI Protein 5e-50 100
hrpB2 YP_198726.1 protein HrpB2 Virulence Hrp PAI Protein 8e-50 100
hrpB2 YP_362159.1 HrpB2 protein Virulence Hrp PAI Protein 1e-49 99
hrpB2 AAB08457.1 HrpB2 Virulence Hrp PAI Protein 2e-49 98
hrpB2 AAP34343.1 HrpB2 Virulence Hrp PAI Protein 1e-49 97
hrpB2 NP_640763.1 HrpB2 protein Virulence Hrp PAI Protein 1e-49 97
XC_3010 YP_244078.1 HrpB2 protein Virulence Hrp PAI Protein 1e-39 72
hrpB2 NP_636606.1 HrpB2 protein Virulence Hrp PAI Protein 1e-39 72