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Name : XOO_0088 (XOO_0088) Accession : YP_449117.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : HrcJ protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 94478 - 95239 bp Length : 762 bp Strand : - Note : HrcJ protein (HrpB3 protein); identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCGCGCGCTGAGATACCTGGTGGTGCTGCTGGCGCTGTTGCTGTCTGCATGCAGTCAGCAGCTGTATTCCGGGCTCAC CGAAAATGATGCGAATGACATGCTCGAGGTGCTGCTGCATGCGGGCGTAGACGCGTCCAAAGTCACGCCAGACGACGGCA AGACCTGGGCGGTGAACGCACCGCACGATCAGGTCTCGTATTCTCTGGAGGCGCTACGCGCGCATGGGTTGCCGCATGAG CGGCACGCCAATCTCGGCGAGATGTTCAAGAAGGACGGGCTGATCTCGACACCCACCGAAGAACGCGTACGTTTCATCTA TGGCGTATCGCAGCAGCTATCGCAGACCTTGTCGAATATCGATGGGGTGATCTCGGCCGATGTGGAAATCGTGCTGCCCA ACAATGACCCGCTTGCCACCTCGGTAAAACCGTCCAGCGCTGCGGTGTTCATCAAGTTCCGCGTCGGTAGCGATCTGACC AGCCTGGTGCCCAACATCAAGACGATGGTCATGCACAGCGTGGAGGGACTCACCTACGAAAACGTCAGTGTCACGCTGGT GCCGGGCGGAGCGGAGAGCGATGCGCAGTTGACCGCATCGGCACCGCCGAGACCTTCACCGTGGCCTTGGGTGGTCGGGT GTGTGGTGACGTTGTGTTTGGCGGGTGCGGCGGCGCTGTATTGGTGGCCAAACCCCCAGGCCGGCCGTTGGGGCGGCTTG CAGCGCCTGCGCGAGTTGACGACGAAAGGCAAAGCCGGGTGA Protein sequence : MRALRYLVVLLALLLSACSQQLYSGLTENDANDMLEVLLHAGVDASKVTPDDGKTWAVNAPHDQVSYSLEALRAHGLPHE RHANLGEMFKKDGLISTPTEERVRFIYGVSQQLSQTLSNIDGVISADVEIVLPNNDPLATSVKPSSAAVFIKFRVGSDLT SLVPNIKTMVMHSVEGLTYENVSVTLVPGGAESDAQLTASAPPRPSPWPWVVGCVVTLCLAGAAALYWWPNPQAGRWGGL QRLRELTTKGKAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB3 | AAF61284.1 | HrpB3 | Virulence | Hrp PAI | Protein | 1e-94 | 100 |
| hrpB3 | YP_198727.1 | protein HrpB3 | Virulence | Hrp PAI | Protein | 2e-94 | 100 |
| hrpB3 | BAB07855.1 | HrpB3 | Virulence | Hrp PAI | Protein | 1e-94 | 100 |
| hrcJ | YP_362160.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 7e-82 | 95 |
| hrpB3 | AAB08458.1 | HrpB3 | Virulence | Hrp PAI | Protein | 5e-82 | 95 |
| hrcJ | AAP34342.1 | HrcJ | Virulence | Hrp PAI | Protein | 3e-83 | 95 |
| hrcJ | NP_640764.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 1e-82 | 94 |
| XC_3009 | YP_244077.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 1e-75 | 83 |
| hrcJ | NP_636607.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 1e-75 | 83 |
