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Name : XOO_0082 (XOO_0082) Accession : YP_449111.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Virulence Product : HrcC protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 88608 - 90425 bp Length : 1818 bp Strand : - Note : HrcC protein (HrpA protein); identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGGCTCCTGCCTGTACCACCACCCACCGCCAACGTGCTCCATTGTTCGCCGTACTGCTGCTCAGCCTGCTGCCGCTGTT CTCGCCACAGGCCGACGCCGCCCAGGTCCCGTGGCATTCGCGCACGTTCAAATACGTCGCCGACAACAAGGATCTCAAAG AAGTGCTGCGTGATTTGTCCGCCAGCCAGTCCATCGCCACCTGGATCTCGCCAGAGGTGACCGGCACGCTGAGCGGCAAA TTTGAAACCTCCCCGCAGAAATTCCTCGACGATCTGGCGGCCACCTACGGCTTTGTCTGGTACTACGACGGCGCCATGCT CAGGATCTGGGGTGCAAACGAATCCAAGAGCGCGACCTTGAGTCTGGGGACTGCATCGACCAAGTCACTGCGCGACGCAC TGGCGCGCATGCGCCTGGACGATTCGCGCTTTCCGGTGCGTTACGACGAGGCCGCGCATGTGGCGGTGGTCTCCGGACCG CCAGGGTATGTGGATACCGTTTCGGCCATTGCCAAGCAGGTCGAGCAGGGCGCCCGTCAGCGCGATGCCACCGAAGTGCA GGTGTTTCAGCTGCATTATGCGCAAGCGGCCGACCACACGACACGCATCGGCGGTCAGGACGTGCAGATTCCAGGCATGG CCAGTCTGTTGCGCAGCATATACGGCGCACGCGGCGCGTCGGTTGCGCCGATAGCCGCGTTTGGCGCCAACTTTGGCCGG GTACAGCCGATCGGCGGTGGGTCCTCCAACACATTTGGCAATGCCGCACAGGGTCAAGGTGGCGGAGCCAGTGGCACCCT TGGGCTGCCTTCGGCCTGGTTCGGCGGGGCCTCGCCGTCCGATCGCATGCCGGTCAGCCCGCCGTTGCCCGGCAGCGGAG CTGCTGCGGGGTCGCCGGCCAGCGTATGGCCGGAGCTCAGCAAGGGACGGCGCGATGAATCCAATCCGATCGACGCCGGT GGTGGCGCAGAGCTGGCCTCAGATGCGCCGGTGATCGAAGCCGATCCGCGCACGAACGCCATCCTGATCCGCGATCGACC GGAGCGGATGCAGAGCTATGGCACCCTGATCCAACAGCTGGACAACCGGCCCAAGTTGCTGCAGATCGATGCCACCATCA TCGAGATCCGCGATGGCGCAATGCAGGATCTCGGTGTCGATTGGCGCTTCCACAGCCAGCACACCGACATACAGACCGGC GACGGCCGTGGCGGTCAGTTGGGTTTCAACGGCGTATTGAGCGGCGCTGCCACCGATGGCGCGACCACGCCGGTTGGCGG CACCTTGACGGCCGTGTTGGGAGATGCCGGACGTTATCTGATGACGCGCGTGTCGGCGTTGGAGACGACGAACAAGGCAA AGATCGTGTCTTCGCCCCAGGTTGCGACGCTGGACAACGTCGAAGCGGTCATGGACCACAAGCAACAGGCATTCGTCCGG GTCAGTGGATACGCATCAGCCGATCTTTATAACCTCTCCGCCGGGGTGTCGTTGCGGGTATTGCCCAGCGTGGTGCCAGG CTCGCCGAACGGTCAGATGCGTCTGGATGTGCGTATTGAGGATGGCCAGCTCGGATCCAACACCGTGGACGGCATTCCGG TCATTACCTCCAGCGAGATCAAGACCCAGGCTTTCGTCAATGAAGGCCAAAGTCTGCTGATTGCAGGATACGCCTACGAT GCCGACGAGACCGATCTGAATGCGGTACCGGGTCTGTCAAAGATTCCGTTGCTCGGTAATCTGTTCAAGCACCGCCAAAA AAGCGGGTCACGCATGCAACGGCTGTTTCTGTTGACCCCACATGTGGTGTCGCCCTGA Protein sequence : MAPACTTTHRQRAPLFAVLLLSLLPLFSPQADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGK FETSPQKFLDDLAATYGFVWYYDGAMLRIWGANESKSATLSLGTASTKSLRDALARMRLDDSRFPVRYDEAAHVAVVSGP PGYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSIYGARGASVAPIAAFGANFGR VQPIGGGSSNTFGNAAQGQGGGASGTLGLPSAWFGGASPSDRMPVSPPLPGSGAAAGSPASVWPELSKGRRDESNPIDAG GGAELASDAPVIEADPRTNAILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTG DGRGGQLGFNGVLSGAATDGATTPVGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAFVR VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSSEIKTQAFVNEGQSLLIAGYAYD ADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpA | BAB07849.1 | HrpA | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpA | AAC95122.2 | HrpA | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcC | YP_198733.1 | hypothetical protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrcC | YP_362166.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 96 |
| hrpA1 | AAB08464.1 | HrpA1 | Virulence | Hrp PAI | Protein | 0.0 | 96 |
| hrcC | AAP34336.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcC | NP_640770.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| XC_3003 | YP_244071.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 83 |
| hrcC | NP_636613.1 | HrcC protein | Virulence | Hrp PAI | Protein | 0.0 | 83 |
