Gene Information

Name : XOO_0081 (XOO_0081)
Accession : YP_449110.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : Hpa1-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 87450 - 87869 bp
Length : 420 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGAATTCTTTGAACACACAATTCGGCGGCAGCACGTCCAACCTTCAGGTTGGCCCAAGCCAGGACACAACGTTCGGTTC
GAACCAGGGCGGCAACCAGGGCATCTCGGAAAAGCAACTGGACCAGTTGCTGTGCCAGCTCATCTCGGCCCTGCTTCAGT
CGAGCAAAAATGCTGAGGAGGGTAAGGGTCAGGGTGGCGATAATGGCGGTGGCCAGGGCGGCAATTCGCAGCAGGCCGGG
CAGCAGAATGGCCCCTCGCCATTCACCCAGATGCTGATGCATATCGTCGGAGAGATTCTCCAGGCGCAGAATGGTGGTGG
TGCTGGTGGCGGCGGGTTCGGCGGCGGGTTCGGCGGTGACTTTAGTGGCGACCTCGGCCTCGGCACCAACCTCTCGAGCG
ACAGCGCATCGATGCAGTAA

Protein sequence :
MNSLNTQFGGSTSNLQVGPSQDTTFGSNQGGNQGISEKQLDQLLCQLISALLQSSKNAEEGKGQGGDNGGGQGGNSQQAG
QQNGPSPFTQMLMHIVGEILQAQNGGGAGGGGFGGGFGGDFSGDLGLGTNLSSDSASMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa1 YP_198734.1 protein Hpa1 Virulence Hrp PAI Protein 1e-27 100
ORF1 BAB07848.1 Hpa1 homolog Not tested Hrp PAI Protein 8e-28 100
hpa1 AAC95121.2 Hpa1 Not tested Hrp PAI Protein 8e-28 100
hpa1 NP_640771.1 Hpa1 protein Virulence Hrp PAI Protein 6e-15 67
hpaG AAP34334.1 HpaG Virulence Hrp PAI Protein 2e-13 59
xopA AAL78294.1 XopA Virulence Hrp PAI Protein 2e-08 45
xopA YP_362171.1 outer protein A Virulence Hrp PAI Protein 3e-08 45