Gene Information

Name : XOO_0080 (XOO_0080)
Accession : YP_449109.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : Hpa2-like protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 86511 - 86984 bp
Length : 474 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence : 
GTGCACGCGCAATTGTCCCGATGTGGTCGTTGGGCAGGAACTGGTCCGCAGCGTATTCTATTTGCAGCAGCGCTGGCATG
CGCGGCACCTTTCGCACGCGCGGATTGCTTCGAAGAGGCTGCCGGATATCAGCACGTCAACCCTTGGGTGTTGCGTGCCA
TTGCCTGGCAGGAATCGCGCGGTCGCGCCGACGCGATCCATCGTAACAACAATGGTACGGTGGATTACGGAAAGATGCAG
ATCAACTCCATCCATCTGCGGCGGTTATTCGGCTATGGAATCTCCAAGGAAGCGTTGATGCAGCCGTGCGTCAGTGTGTA
TGTAGCAGCTTGGCGGTTGCGCGAGATGACCAATAAATATGGAAATACCTGGGCTGCAGTAGGCGCCTACCATTCGGAAA
CGCCGGGGGAGCGTGATAAATATGCGCATGCCATTCATTCGATTCTGCTAAGGCGTGGTGTGATTGGTGAATAG

Protein sequence : 
MHAQLSRCGRWAGTGPQRILFAAALACAAPFARADCFEEAAGYQHVNPWVLRAIAWQESRGRADAIHRNNNGTVDYGKMQ
INSIHLRRLFGYGISKEALMQPCVSVYVAAWRLREMTNKYGNTWAAVGAYHSETPGERDKYAHAIHSILLRRGVIGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 YP_198735.1 protein Hpa2 Virulence Hrp PAI Protein 1e-60 99
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 2e-52 99
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 2e-54 95
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 1e-54 95
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 3e-51 94
hpaH AAP34333.1 HpaH Virulence Hrp PAI Protein 4e-56 94
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 4e-50 92
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 4e-50 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_0080 YP_449109.1 Hpa2-like protein VFG0994 Protein 1e-11 44