Gene Information

Name : XOO_0708 (XOO_0708)
Accession : YP_449737.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 760713 - 761906 bp
Length : 1194 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGTCCAACCGCACCACTCATAGCCATGACGGCGATCGCGCGCTGTCGCTTGCAACGCTGGCGATCCATGGAGGGCAGTC
GCCGGATCCCAGCACCGGCGCAGTGATGCCGCCGATCTACGCCACGTCCACGTATGCGCAATCCAGCCCCGGCGAACACC
AGGGCTTCGAATATTCCCGCACCCACAACCCCACGCGCTTCGCCTACGAGCGCTGCGTGGCGGCGCTGGAAGGCGGCACG
CGCGCGTTCGCGTTCGCCTCCGGCATGGCTGCCACTTCCACCGTGATGGAGTTGCTGGATGCCGGCAGCCACGTGGTGGC
GATGGACGATCTGTACGGCGGCACCTTCCGCCTGTTCGAGCGCGTGCGCCGTCGCACCGCCGGCCTGGATTTCAGTTTCG
TCGACCTGACCGACCCGGCCGCGTTTAAGGCGGCGATCCGCGCAGACACCAAGATGGTGTGGATCGAAACGCCGACCAAC
CCGATGCTCAAGCTGGTCGACATCGCCGCCATTGCGGTGATCGCGCGCAAGCATGGCCTGTTGACCGTGGTCGACAACAC
CTTTGCCTCGCCGATGCTGCAGCGCCCGCTCAGCCTGGGCGCCGACCTCGTCGTGCACTCGGCCACCAAGTACCTCAACG
GCCACTCGGACATGGTGGGCGGCATTGCGGTGGTGGGCGACAACGCCGAGCTCGCCGAGCAGATGGCGTTCCTGCAGAAC
TCCATCGGTGGCGTGCAAGGCCCGTTCGACAGCTTCCTCGCGCTACGCGGATTGAAGACCTTGCCGCTGCGCATGCGCGC
GCACTGCGAAAATGCCCTGGCGCTGGCGCAATGGCTGGAAACGCACCCCGCCATCGAAAAGGTGATCTACCCCGGCCTGG
CCTCGCACCCGCAGCATGTGCTCGCGAAACGCCAGATGTCCGGCTTCGGCGGCATCGTCTCCATCGTCCTCAAGGGCGGC
TTCGACGCAGCCAAGCGTTTCTGCGAGAAGACCGAGCTGTTCACCCTGGCCGAATCGCTCGGTGGTGTTGAAAGCCTGGT
GAACCATCCCGCCGTCATGACGCACGCCTCCATCCCCGTTGCCCGCCGCGAGCAGCTCGGCATCAGCGATGCGCTGGTGC
GGTTGAGCGTGGGAATCGAGGATCTTGGGGATTTGCGTGGGGATTTGGAGCGGGCGTTGGTGAATCAAAATTGA

Protein sequence :
MSNRTTHSHDGDRALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGT
RAFAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTN
PMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGG
FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALVNQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-82 51
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-81 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-58 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_0708 YP_449737.1 cystathionine gamma-synthase BAC0207 Protein 2e-68 46