Gene Information

Name : alr (XOO_0631)
Accession : YP_449660.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 684693 - 685793 bp
Length : 1101 bp
Strand : +
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
GTGCGTCCTGCGCAAGCGTCGATCGATCTGGAGGCGTTGCGCCACAACTACCGCCTGGCCAAGCGCCTGGGTGGCAGCAA
GGCGCTGGCGGTGGTCAAGGCCGATGCTTACGGGCATGGCGCAGTGCCTTGCGCGCAGGCGCTGGAACCGGAGGCCGATG
GCTTCGCGGTGGCCTGCATCGAAGAGGCGCTGGAACTGCGCCAGGCCGGCATCCGCGCGCCAATCCTGTTGCTGGAAGGG
TTCTTCGAGCACGACGAGCTGCGCCTGATCGCCGAGCACGACCTGTGGACGGTGGCGGCTACGCCGCAACAGGTGCGCGC
GCTGGCCGCGTTCCAGAGCCCACGACCGTTGCGGGTGTGGTTGAAGATGGACAGCGGCATGCATCGGCTGGGCCTGTCGC
CGGAAGACTTCCGCGCCGCATGGCTGCGCCTGCGCGGGCTGCCGCAGATCGCCTCGCTGGTGCTGATGACCCACCTGGCG
CGCGCCGACGAATTGGACTGCAGCCGCACAGACGAACAGGCGGTGGCCTTTGCGCTGACCGCCGGCGGCATGCGCGCGGA
AACCAGTCTGCGCAATTCGCCCGGCCTGCTCGGCTGGCCGGCGCTGCGCAACGACTGGTCGCGCCCGGGGCTGATGTTGT
ACGGCGCCAACCCGTTCCCGCAGGACACCGAGAACACTGCGCAATTGCGCCCGGTGATGACGCTGCGCTCGCGCATCATT
TTGGTCCGCGACCTGCCGGTCGGCGAACCGGTGGGCTACGGCGCCCGTTTTGTCGCCGAACGACCGACCCGCGTCGGCGT
GGTGGCGATGGGCTATGCCGACGGCTACCCGCAGTTCGCGCCGAACGGCACCCCGGTGCTGGTGGATGGCCAGGTCTGCC
CATTGATCGGTCGCGTCTCGATGGACATGCTCACCGTGGACCTCACCGACCATCCGCAGGCCGACATTGGTGCCACCGTG
CAGCTGTGGGGCCAGGCACCACGCGTTGGCCCACTGGCCACGCAATGCAATGTCAGCGCGTATCAGCTGTTGTGTGGACT
CAAGCGCGTGCCGCGGACGTATGTGGCTAGTGCGGCAGTGGGCGAGGTTGCAGCGCGGTAA

Protein sequence :
MRPAQASIDLEALRHNYRLAKRLGGSKALAVVKADAYGHGAVPCAQALEPEADGFAVACIEEALELRQAGIRAPILLLEG
FFEHDELRLIAEHDLWTVAATPQQVRALAAFQSPRPLRVWLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLA
RADELDCSRTDEQAVAFALTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSRII
LVRDLPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPNGTPVLVDGQVCPLIGRVSMDMLTVDLTDHPQADIGATV
QLWGQAPRVGPLATQCNVSAYQLLCGLKRVPRTYVASAAVGEVAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 2e-59 44