Gene Information

Name : XOO_0561 (XOO_0561)
Accession : YP_449590.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : phage-related integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 613953 - 615140 bp
Length : 1188 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGCGCGGGGACGTAAACGGAGGTTCAACCCGAATATTCCAGGTCACATCGAGCAGGAGGCGCTCCCTAAAGGCATCTA
CTGGGAGAACGGCCGCTGGTACATGCATGAAGACCATCCGGACGGTGGCCGACAAGTGAAGCGTACGGTCGCCTTTCGAA
GTGCTCGTCTCTCTGAACTCCATGCAATCGCAGAATCTCGACTACGAGGGGACGTGCGTGGCACGCTGCGTTACCTCTTC
GACCGTTTCCACGAAGCGAGCGAATTTAAGGAACTACAGCATGACACGCAGAAGGATTACCGACGCTACGCTGATACGCT
TGCCAACTATGTCCGCAAGGATGGGTCCAAGCTCGGTGGTGTGCAGTTGGAACACATCACTACGCCCGTGGTGCAGCGGC
TGCTTGAGACCTTTGCAAACGGGAGACCGGCTACTCGCCTGCAGCAGGCGCTTCCTCCAACGCCTAGCAAGGCCAATCAT
CTGTATCGCTACCTCCGGCGAACACTCGCGTGGGGGGTGCGCCATGGCTACTGCAAGGAGAATCCTGCAATTGGTGTTCT
CCAGGCGAAGGAGGCTAAGGCCTTCAGGATGCCTACGCCTGATGCGTTCGAGGCTGTTCTACAGTTCGCCCGCGAGCGCG
GCGCTTTAAAGCCTCACACCAAAGGTAGCTTTCCCAGCTATCTCCCCCCAGTCATGGTGCTGGCATACAGCGCCAGGCTG
CGCGGTATCGAAGTTTGCTCACTCACTGACGCACATCGGCTAGAACACGGCGTGCACGCGTCACGTAGAAAGGGATCGCG
CGACACACTCACCACGTGGGACGCCCACATGACGGAAGCATGGGAGGCGTTGCTGGCTCGCCGATCAGAAATCTGCAACA
AGCCTGGCCGCAACTTTCCGATACCAATGAAGCCGGAAGAACGCTTCTTCCTCATTGAGCAGACCGGCAATCCGATTGTC
AAGTCGTCACTCGACAGCGCATGGCAGCGATTCATCCCTGCGGCAATACGCGATGGCGTGATCAAGTCTGAGGAGCGCTT
CTCACTACATGGTTTGAAGCATCGGGGCGTTACCGACACCGAGGGCAATCGAGGCGATAAGCAAGATGCAGCTGGGCACG
TCTCGTCGTCGATGACAGATCGTTACGACCACGAGTTACCGGTCGTGAAACCTCCACGACGGCGCTGA

Protein sequence :
MARGRKRRFNPNIPGHIEQEALPKGIYWENGRWYMHEDHPDGGRQVKRTVAFRSARLSELHAIAESRLRGDVRGTLRYLF
DRFHEASEFKELQHDTQKDYRRYADTLANYVRKDGSKLGGVQLEHITTPVVQRLLETFANGRPATRLQQALPPTPSKANH
LYRYLRRTLAWGVRHGYCKENPAIGVLQAKEAKAFRMPTPDAFEAVLQFARERGALKPHTKGSFPSYLPPVMVLAYSARL
RGIEVCSLTDAHRLEHGVHASRRKGSRDTLTTWDAHMTEAWEALLARRSEICNKPGRNFPIPMKPEERFFLIEQTGNPIV
KSSLDSAWQRFIPAAIRDGVIKSEERFSLHGLKHRGVTDTEGNRGDKQDAAGHVSSSMTDRYDHELPVVKPPRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13504.1 site-specific recombinase Not tested PAGI-6 Protein 5e-64 42