Gene Information

Name : XOO_4358 (XOO_4358)
Accession : YP_453387.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : MFS transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 4921173 - 4922540 bp
Length : 1368 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGTGCCGGTGCCAAGACACTGGGGCCGGCTGGCCCACCGACTGCTGGAGCGTGCGATGACCCAAGCCACCCGGCCCCT
GCCACCCCCCGATGGCATGGGCCCCACCTACCGCAAGATCCTGTGGCGGCTGATCCCGTTCCTGTTCGTCTGCAATCTGT
TCAATTACCTGGACCGGGTCAACGTCGGCTTCGCCAAGCTGCAGATGCTGCGCGATCTGGGCATGAGCCAGACCGTGTAC
GGGCTGGGCGCGGGGATCTTCTTCATCGGTTACCTCGCTTGCGGGGTGCCCAGTAATCTGATCCTGCAGCGCATTGGCGC
CCGGCGCTGGGTGGCGATCATGATGGTCAGCTGGGGCCTGCTGTCCACCTGCCTGCTGTTCGTGCGCACCCCGGCCGGGT
TCTACACGCTGCGCCTGCTCACCGGTGCGGCCGAGGCGGGCTTCTTCCCCGGCATCTTGCTGTACCTGACGCGCTGGTTT
CCGCGTGACCGGCATGGCCGGGTCACGACCGTCTTCATGTCGGCGATCCCGATCTCCGGGGTGCTGGGGGGGCCGCTGTC
GGGCTGGATCCTGGGCTATTTCTCGGCCGGGCAGGGCGGGCTGGCCGGCTGGCAATGGATGTTCCTGCTGCAGGGCCTGC
CGACCGTGTTGCTGGGCAACGGAGTGTGGTTCCTGCTCAGCGACGGCGTGCAAGAAGCGAGCTGGCTCAACCCGCAGGAA
AAACAGGCCTTGGCCCGCGTACTGGCCGACGACGAAGCAGGCAAGCCGGCCGGTGCGTCCACCTCGCTGCGCGCGGTGCT
GTGCAACCCGGCGGTGTGGCTGCTGGGCACGGTGTACTTCTGCATTCAGAGCGGGGTGTATGCGATCAACTTCTGGCTGC
CTTCGATCATCCAGGACAGCGGCGTCACCGACCCGGTCCGCATCGGTCTGATGAGCGCGATCCCGTACTTGGCGGCGGCA
GTGTTCATGGTGCTGATGGGCCGCTCGGCCGACCGCCGCGGCGAGCGTCGCTGGCATCTGGTGATTCCGTTGCTGATGGG
CGCGGCCGGCCTGTGCATCGCCGCCAGCGTCACCGACAACCTGGGCTTGGCCTTGTTCGGTATGACCCTGGCCACGATGG
GGGCAGTCAGCGGCTTGCCGCTGTTCTGGCCGCTGACCAACGGCTTTCTCACCGCCGCTGCCGCGGCCGGTGGGCTGGCG
CTGATCAATTCCACCGGCCAGGTCGCTGGCTTCGTCAGCCCCTATCTGGTGGGCTGGATCAAGGACACCACCCACAGCAC
CCAACTGGCGCTGTACGTGCTGGCCGGCGCCATGCTGCTGGGCGCCGCGTTGGTGTTGCGGGTGCCGGCGTGCGCGGTGA
ACCAGTGA

Protein sequence :
MVPVPRHWGRLAHRLLERAMTQATRPLPPPDGMGPTYRKILWRLIPFLFVCNLFNYLDRVNVGFAKLQMLRDLGMSQTVY
GLGAGIFFIGYLACGVPSNLILQRIGARRWVAIMMVSWGLLSTCLLFVRTPAGFYTLRLLTGAAEAGFFPGILLYLTRWF
PRDRHGRVTTVFMSAIPISGVLGGPLSGWILGYFSAGQGGLAGWQWMFLLQGLPTVLLGNGVWFLLSDGVQEASWLNPQE
KQALARVLADDEAGKPAGASTSLRAVLCNPAVWLLGTVYFCIQSGVYAINFWLPSIIQDSGVTDPVRIGLMSAIPYLAAA
VFMVLMGRSADRRGERRWHLVIPLLMGAAGLCIAASVTDNLGLALFGMTLATMGAVSGLPLFWPLTNGFLTAAAAAGGLA
LINSTGQVAGFVSPYLVGWIKDTTHSTQLALYVLAGAMLLGAALVLRVPACAVNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 8e-93 51
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 8e-93 51
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 8e-93 51
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 8e-93 51
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 2e-95 51