Gene Information

Name : XOO_4327 (XOO_4327)
Accession : YP_453356.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : ISXo8 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG5659
EC number : -
Position : 4890276 - 4891595 bp
Length : 1320 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
GTGTTGAATAGGTCACTGGAAGTGCGTTTTGAACAGTACGGGGAAGTAGTTGCTGCCGTCCTGTCCCATGCGGATCGCAA
ACAGCCCGCACACTGGTACCTGAAAGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGC
ACCCGCAGAACGTGCGCTCAGCCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTG
GCGGCGGTGGCGGCACAGGTGCTGCCGACCCTGAGCAGGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATT
TTCAAAGAAGGGGGTGCATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTG
CCGTGAGTTTGTCGATCGCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAG
GACACTGTGCGGCGCAAGAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGAT
CGACAGCGCGCTGGCGACAGGGATGGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCGAGACCCACTGGCGAG
ACCAGCTCAGCGAACGCGGCCTGTTGTACATGGTCGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCT
GCGCCCATGCCGCCAGCCAGCCCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTC
GGTACATGAAGTCGCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGACGCAACGCTCA
GTTCGCGGTTCGCGGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGG
CCGCCGGGAGAGTCCGAGCCCCGCCACTACTGGTTCTCGACGCGACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCAC
GGCACAAGGCCGATGGCGGATTGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGTA
ACTGGCGTGGTTTTCACCATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAA
AAAAACTCCGTCGCATTCAAGATGCCTGCAGTATCCAAAAGTGTCCGCCCGCGCGGGTCTGGCCCCAATGCAACGTCACC
ATCCCAACTCGATTGCCACGCTGGCCTTCGGACTGGCTAG

Protein sequence :
MLNRSLEVRFEQYGEVVAAVLSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL
AAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ
DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP
APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW
PPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK
KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XOO0073 YP_198712.1 ISXo8 transposase Not tested Hrp PAI Protein 3e-149 99
XOO0069 YP_198708.1 ISXo8 transposase Not tested Hrp PAI Protein 2e-126 98