|
Name : XOO_4160 (XOO_4160) Accession : YP_453189.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 4698194 - 4699531 bp Length : 1338 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGAGCAACACCGTCTACATCGGCGCGAAAGAATATTTCCCCGGCATCGGCAAGATCGGTTTCGAAGGCCGCGAGTCGGA CAACCCGCTCGCGTTCAAGGTCTACGATGCCAACAAGACCATTGGCGACAAGACCATGGCCGAGCATCTGCGCTTTGCCG TGGCCTACTGGCACAGCTTCTGCGGCAATGGCGCCGATCCGTTCGGCCCGGGTACGCGTGCGTATCCGTGGGATGTGGGC AACAGCGCGCTGGCGCGGGCTGAAGCCAAATCCGATGCCGCGTTCGAGTTCTTCACCAAGCTCGGCGTGCCGTACTACTG CTTCCACGACATCGACCTGTCGCCGGATGCCGATGACATCGGCGAATACGAGAGCAACCTCAAGCACATGGTGGGTGTTG CCAAGCAGCGTCAGGCCGACACCGGCATCAAGCTGCTGTGGGGCACGGCCAATCTGTTCTCGCATCCGCGCTACATGAAT GGTGCCTCGACCAACCCGGACTTCAACGTCGTCGCGCGTGCGGCGGTGCAGGTCAAGGCCGCGATCGATGCCACGGTGGA GCTGGGCGGCGAAAACTACGTGTTCTGGGGCGGCCGCGAAGGCTATGCCTGCCTGCACAACACGCAGATGAAGCGCGAGC AGGACAACATGGCGCGGTTCCTCACCCTGGCGCGCGACTACGGCCGCAGCATCGGCTTCACCGGCAACTTCCTGATCGAG CCAAAACCCATGGAGCCGATGAAGCATCAGTACGATTTTGATAGCGCGACCGTGATCGGTTTCCTGCGTCAGCACGGTCT GGATCAGGACTTCAAGCTCAACATCGAAGCCAACCACGCCACCTTGTCCGGCCATAGCTTCGAGCATGACCTGCAGGTCG CCTCCGATGCCGGCCTGCTGGGCAGCATCGATGCCAACCGCGGCAACCCGCAGAACGGTTGGGATACCGACCAGTTCCCG ACCGATCTGTACGACACCGTTGGTGCGATGCTGGTAGTGCTGCGTCAGGGTGGCTTGGCACCGGGGGGGTTGAACTTCGA TGCCAAGGTGCGTCGCGAATCGTCCGATCCGCAGGACCTGTTCCTGGCGCACATCGGCGGCATGGACGCGTTCGCACGCG GGCTGGAAGTGGCCAATGCACTGCTGACGTCCTCGCCGTTGGAGCAGTGGCGCGCCGAACGTTATGCCAGCTTCGACAAT GGTACCGGCGCCGACTTTGCCGCAGGCAAGATCACGCTGGCGGATCTGGCCGCACATGCCGCCGGCAATGCGCCCAAGCA GATCAGCGGCCGCCAGGAAGCGTACGAAAACTTGATCAATCAGTATCTGACGCGTTGA Protein sequence : MSNTVYIGAKEYFPGIGKIGFEGRESDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDVG NSALARAEAKSDAAFEFFTKLGVPYYCFHDIDLSPDADDIGEYESNLKHMVGVAKQRQADTGIKLLWGTANLFSHPRYMN GASTNPDFNVVARAAVQVKAAIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRSIGFTGNFLIE PKPMEPMKHQYDFDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFP TDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTSSPLEQWRAERYASFDN GTGADFAAGKITLADLAAHAAGNAPKQISGRQEAYENLINQYLTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 7e-101 | 52 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 6e-101 | 52 |
