Gene Information

Name : XOO_4099 (XOO_4099)
Accession : YP_453128.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4622958 - 4623845 bp
Length : 888 bp
Strand : +
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGGAACTGCGCCACCTGCGTTACTTCCTGGCGGTCGCCGAAGAAGGCAACTTCACCCGTGCTGCCGCGCGGGTGGGCAT
CGGCCAGCCGCCGCTGAGCCAGCAGATCCAGACGCTGGAACGCGAGCTGGGCACGCCGTTGTTTCGGCGCACCCACAGCG
GGGCCGAGCTCACCCTGGCCGGCGAGGCATTCCTGGGTGAAGTGCGCCGCGTGCTCGCCGATGTGGAACGCGCTGCCGAA
ACCGCACGCCGGGTGGCGCGTGGCGAATCCGGGCGGTTGCGCCTGGGCTTCACCGCCTCGGCCGCCTTCAGCCCGGTGGT
GCCGCGGTTGATTCGCGATTTCCGCCGCACGTGGCCGCAAGTCGAATTGCTGCTGGACGAGACCAATACCGCCAGCCTGC
TGGTGGGGTTGGCCGAAGGCAGGCTGGATGCGGCGTTCGTGCGCTACGGTCTGAGCACGCCAGCGGATCTGCAGTTGCTG
CGCTTTACCGACGAGCCGATGAAGATCGCCGTCCCCGCCGCGCACCCCCTGGCCACGCGCAACAGCGCCCCGTTGGCGGC
ACTGGCCGGCGAGCCTTTCATCCTGTTTCCGCGCAGCTTCGGCTCCAGCCTGTACGACGAAATCCTGGCCGCCTGCCGCG
AATCCGGCGTGACCCTGCGCATCACCCAGGAAGCGCCGCAGATGTCGTCGATCATCAATCTGGTGGCCGCCGAACTGGGC
GTCTCGGTGGTGCCTGCCTCCACTGCACAGCTGCAGCGCCCCGGCGTGCGCTATCTGGATATCGAAGGCCATATGCCGCT
GGCGCGCCTGGCCCTGGCCGTCGCGCCGGCTGCATTGGAGACCACACCATTGGTGCGGCATTTATGGGCGTTGGCGGAGT
TGATCTGA

Protein sequence :
MELRHLRYFLAVAEEGNFTRAAARVGIGQPPLSQQIQTLERELGTPLFRRTHSGAELTLAGEAFLGEVRRVLADVERAAE
TARRVARGESGRLRLGFTASAAFSPVVPRLIRDFRRTWPQVELLLDETNTASLLVGLAEGRLDAAFVRYGLSTPADLQLL
RFTDEPMKIAVPAAHPLATRNSAPLAALAGEPFILFPRSFGSSLYDEILAACRESGVTLRITQEAPQMSSIINLVAAELG
VSVVPASTAQLQRPGVRYLDIEGHMPLARLALAVAPAALETTPLVRHLWALAELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 4e-58 55