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Name : XOO_4000 (XOO_4000) Accession : YP_453029.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXoo6 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 4508731 - 4509873 bp Length : 1143 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCAACTGACCTTCGGCGACGCGGAGTACAACGGCAAGCGCAAGCGGACGCGGCGTGAGGTGTTCTTGGCCGAGATGGA CCAGGTCGTGCCGTGGAAGGGCCTGCTGGCGCTGATCGAGCCGCACTATCCAAAGTCGGGGCAGCCGGGGCGACAGCCGT ATCGGCTGGAAACGATGCTGCGCATCCACTTTTTGCAGCAGTGGTATGCGCTGAGCGATCCCTCGGCGGAAGAAGCGCTG TACGACACGGTGTCGATGCGCCGTTTCGCCAAGATCGGCGGGCTGGACGAGGTGCCGGATGAAACGACGATTCTCCACTT CCGGCATCTGCTGGAGCGGCATGATCTGGCGCGCAAGCTGTTCAGGGTCAACGCGCACCTGTCGCGTAAAGGGCAGAGTC TGCGGGGCGGGACGATCGTGGATGCCACGATCATTGCGGCGCGCAGTTCGACCAAGAACAAGCAGGGCGAGCGCGATCCG GACATGCACCAGACCAAGAAAGGGAATCAGTATGACTTCGGGATGAAGGCGCACATCGGGGTGGACGATGACTCCGGGCT GGTGCACCATGTCGAATGCACGGCGGCCAACGTGGCCGATATCACGCAAGCGCACAAGCTGCTGCACGGCAAGGAAGACA CGGTGTGCGGGGACAGCGGCTACACCGGGCTTGAGAAGCGCGAGGAGATGAAGCGCAAGCGCACGCTGCGCTACCTGATC GCCGAGAAACCCTCGAAGCTGAAGCAGATCAAGAACAAACGCGAACTGAAGTTGGCCAAGCGGTGGGAGCACACCAAGGC CAGCCTGCGGGCGAAGGTGGAACACCCGTTCCGGGTGATCAAGCGTCAGTTTGGTTACGTCAAGGTGCGCTATCGCAGCC TGGTCAAGAACACCGCGCAGATGCTGACGCTGTTTGCGCTGTCGAATCTGTGGCTGAAGCGCAAAGAGTTAATGCCTGCT GCGGGGAAGGTGTGCCTGTCACCCGGGAAATACACCGAAAACGCGCCGGAAACGGCAAAAAATCAGGGGTTTGAGCGCCC TCAGCGCCGCAGATGTGGCGTGCTTCATTTTCCGGCCGCGTTGATCAGGCCATCCCTAACGCCGGAATTAAGCCGAGTTG CGAAGCAACTTCGGATTGAATGA Protein sequence : MQLTFGDAEYNGKRKRTRREVFLAEMDQVVPWKGLLALIEPHYPKSGQPGRQPYRLETMLRIHFLQQWYALSDPSAEEAL YDTVSMRRFAKIGGLDEVPDETTILHFRHLLERHDLARKLFRVNAHLSRKGQSLRGGTIVDATIIAARSSTKNKQGERDP DMHQTKKGNQYDFGMKAHIGVDDDSGLVHHVECTAANVADITQAHKLLHGKEDTVCGDSGYTGLEKREEMKRKRTLRYLI AEKPSKLKQIKNKRELKLAKRWEHTKASLRAKVEHPFRVIKRQFGYVKVRYRSLVKNTAQMLTLFALSNLWLKRKELMPA AGKVCLSPGKYTENAPETAKNQGFERPQRRRCGVLHFPAALIRPSLTPELSRVAKQLRIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 2e-95 | 63 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 4e-69 | 59 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 6e-69 | 59 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 1e-55 | 54 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-55 | 46 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 2e-55 | 46 |
