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Name : XOO_3953 (XOO_3953) Accession : YP_452982.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : IS1113 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 4452051 - 4453235 bp Length : 1185 bp Strand : - Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : ATGCTGGACGAACTGACGTCAGGCTGCAAGACGCCACAGGACGTGGAGAAGCTGTTTTCGCAAATGTTGCAGCACATGAT CAATCGCTCGTTGGAGGCGGAGATGCAAGCCCATGTGGGCCATGCGCCGCATGGGCGCTCAGGCGGCAACGTGCGCAATG GCAAGAGCCGCAAGACGGTGCAAAGCGCGTTTGGCGAGTTGCAGATCGAGACCCCGCGCGACCGCGCGGGCACGTTCGCG CCACAGTTGGTGAAGAAGCGCCAGGTGCGGCTGGCGGGGATGGAGGAGAAGATTCTAGCGTTGTACGCGCGCGGCATGAC CACGCGCGACATCGAGTCTGCGCTGGTGGACGTGTATGGGGTGGAGATATCGCATGCGTTGATCGCACAGGTGACCGACG CGGTGCTGGAGGAGGCGCGGGCATGGCAATCGAGGCCGCTGGAGCCGATCTATCCGATCGTGTGGCTGGACGGCATCGTG GTGAAGGTGCAGCACAACAAGCAGGTCATCAACAAGGCCGCGCACGTGGTGCTGGGGGTCAACCTGCGCGGGGAGAAGGA AGTGCTTGGCCTGTGGTTGGCTGAACACGAGGGCGCCAAATACTGGCTGTCGGTGTTGACCGAACTGCGTCATCGCGGCG TGCGCGACATCTACATCGCCTGCATGGATGGCTTGAAGGGCCTGCCCGAAGCGGTGCAAGCGGTGTTTCCGCAGACGCTC ACGCAACTGTGCATTGTGCATTTGGTGCGGGCCAGCCTGCGCTACGTCAACGCAGGCGACAGCAAGGCGGTTGTGGCTGC GCTCAAGCGCATCTATCAGTCGGCCACGGCGGAAGAAGCGGCGGCGGAACTGGAGGCGCTGGACACGCAGTGGGGCGACA AATACCGTGCGGTGGTCCGCTTGTGGCGGGGCAACTGGGACAACATCATCCCGTTCTTGCAGTTCGTGCCGCAGATCCGC AAGGTGATCTACACCACCAATGCCATCGAATCGTTGAACATGGTCATGCGCAAGCTCACCCGCAACCGGCGTATTTTCCC CAACGACGATTCGGCGCTCAAATCGTTGTTTTTGGCCGTGCGCGAGGCATCGAAGAACTGGCGGTCCATCCATCACTGGA AACCGGCTCTGCAAAGCTTCCAGGTGATGTTCGGCGAAGAACGCGTGCCGATGAATGCGCTATGA Protein sequence : MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSAFGELQIETPRDRAGTFA PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHALIAQVTDAVLEEARAWQSRPLEPIYPIVWLDGIV VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAKYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFLQFVPQIR KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 8e-98 | 50 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 6e-79 | 47 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 6e-80 | 46 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 4e-80 | 46 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 5e-87 | 44 |
