|
Name : XOO_3941 (XOO_3941) Accession : YP_452970.1 Strain : Xanthomonas oryzae MAFF 311018 Genome accession: NC_007705 Putative virulence/resistance : Unknown Product : ISXoo3 transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4438704 - 4439519 bp Length : 816 bp Strand : + Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker DNA sequence : GTGCGCGAGTGGATCGAAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGTGCGCTGCGCTA TCGCCCGCGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCGCTATGGCGTGG GGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCTGTATTGCGAGCAGCAG CTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCC GGTGTGGTCGATGGACTTCGTGTTCGACCGCACCGCCGAAGGTCGGGCGATCAAGTCTCTGGTGATCTTGGACGACGCGA CACACCAGGCAGTCGCCATCGACGTGGAACGCGCCATCTCCGGCCACGGGGTAGCACGCGTGCTGGATCGGTTGGCACAC AGTCGTGGCCTGCCGAAGATGATCCGCACCGACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGC CAATCGTGTGCAGCTACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTATGTCGAATCCTTCAACGGCCGGCTAC GCGACGAATGCCTCAACGAACATGGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATAC AACCAACACCGCCCAAAGAAAGCAATCGGCGCAATGACGCCGGCAACGTATGCCCAGCAGTTGGCCAATAGCGAGATCAT CACCCCCGGACTCTAA Protein sequence : MREWIEGGASERCALAAIGMSASALRYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERLYCEQQ LQVRRRTRKKVPVGERAPLLRPTKANPVWSMDFVFDRTAEGRAIKSLVILDDATHQAVAIDVERAISGHGVARVLDRLAH SRGLPKMIRTDNGKEFCGKAMVAWAHANRVQLRQIQPGKPNQNAYVESFNGRLRDECLNEHGFPTLLHARTEIERWRREY NQHRPKKAIGAMTPATYAQQLANSEIITPGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 9e-46 | 55 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 1e-54 | 52 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-34 | 42 |
