Gene Information

Name : XOO_3931 (XOO_3931)
Accession : YP_452960.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : SugE protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4430410 - 4430724 bp
Length : 315 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence : 
ATGCTCTGGATCTATCTGCTGCTGGCCGGCCTGTTCGAGATCGGCTTTGCCATGGGACTGAAATACAGCGACGGCTTCAC
CCGACTGTGGCCGACCGTGCTGACCATTGGTCTGGCCGGCACCAGCCTCTGGTTTCTGACGCAGGCGCTGAAGACCATTC
CGGTCGGCACCGGCTACGCGATCTGGACCGGCATCGGCGCCCTGGGCGTGACCATCGCCGGCATCGCGCTATTCGGCGAC
AGCGCGTCGTGGCCGCGATTGGCGTGCATTGGTTTGATCGTGTCTGGCGTGATCGGGTTGAAGTTCGTCTCGTAG

Protein sequence : 
MLWIYLLLAGLFEIGFAMGLKYSDGFTRLWPTVLTIGLAGTSLWFLTQALKTIPVGTGYAIWTGIGALGVTIAGIALFGD
SASWPRLACIGLIVSGVIGLKFVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 5e-10 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_3931 YP_452960.1 SugE protein BAC0378 Protein 3e-19 54
XOO_3931 YP_452960.1 SugE protein BAC0322 Protein 3e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_3931 YP_452960.1 SugE protein VFG1586 Protein 2e-10 41