Gene Information

Name : XOO_3779 (XOO_3779)
Accession : YP_452808.1
Strain : Xanthomonas oryzae MAFF 311018
Genome accession: NC_007705
Putative virulence/resistance : Virulence
Product : two-component system regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 4273315 - 4274052 bp
Length : 738 bp
Strand : -
Note : identified by sequence similarity; ORF located using Blastx/Glimmer/GeneHacker

DNA sequence :
ATGACGGCCACGCAAGTGCGGGTGCTAATCGCCGATGACGAGCCACTGGCGCGCGAGCGCCTGCGCATGCTGCTGGGCGA
GCATCCGCAGGTCGAGGTGATTGGCGAGGCCGAAAACGGCCAGCAGGTCGTGCAGCAGTGCGAACACCTGCATCCGGATC
TGGTGCTGCTGGACATCGCCATGCCCGGTGTCGACGGCTTGGGAACCGCGCGCTTGCTGCGGCAGAGCCAGCCGCCGCCG
GCGGTGGTGTTCTGCACCGCCTACGACCAGCATGCACTGTCCGCGTTCGACGCGGCGGCGCTGGATTACCTGATGAAACC
GGTGCGCCCGGAACGGCTGGCCTCCGCCCTGGAAAAGGTCGCCACCTTCCTCGCCGGCCGCGCGCCCGGCACCGCGCCCA
GGCCGGTGCGCACCCATCTGTGCGCACGCCTGCGCGGTAGCCTGCGGCTGATCGCCATCGGCGACATCCGTTACCTGCAG
GCCGAAGAAAAGTACGTCATCGTCCATCACACCCGCGGCGAGGACCTGATCGAAGAGTCGCTCAAATCGCTGGAAGACGA
ATTCGCCGACCGTCTGGTGCGCATTCACCGCAATTGCCTGGTCGCCCGCGACGAGCTGGTGGAACTGCGCCGCAGCGGCG
ATGGCCAGGTGCATGCGGTGCTGCGCAACGTACCGCAGACCCTGGAAGTGAGTCGGCGCTGTGTCGCCAGCCTGCGCGAT
CAATTACGCCAACTGTGA

Protein sequence :
MTATQVRVLIADDEPLARERLRMLLGEHPQVEVIGEAENGQQVVQQCEHLHPDLVLLDIAMPGVDGLGTARLLRQSQPPP
AVVFCTAYDQHALSAFDAAALDYLMKPVRPERLASALEKVATFLAGRAPGTAPRPVRTHLCARLRGSLRLIAIGDIRYLQ
AEEKYVIVHHTRGEDLIEESLKSLEDEFADRLVRIHRNCLVARDELVELRRSGDGQVHAVLRNVPQTLEVSRRCVASLRD
QLRQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-42 43
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOO_3779 YP_452808.1 two-component system regulatory protein VFG0119 Protein 2e-45 46